Gene info for GEMAOFIL_05387 in Pseudomonas lactucae CFBP13502

Annotation: HTH-type transcriptional regulator CdhR
Type 1: Protein-coding gene
Located on scaffold CFBP13502_contig_1, - strand, nucleotides 5,911,786 to 5,912,889
See nucleotide sequence around GEMAOFIL_05387 or for all of scaffold CFBP13502_contig_1

Other databases: NCBI

Nearby Genes

500 ntGEMAOFIL_05382 and GEMAOFIL_05383 are separated by 48 nucleotidesGEMAOFIL_05383 and GEMAOFIL_05384 are separated by 50 nucleotidesGEMAOFIL_05384 and GEMAOFIL_05385 are separated by 12 nucleotidesGEMAOFIL_05385 and GEMAOFIL_05386 are separated by 1001 nucleotidesGEMAOFIL_05386 and GEMAOFIL_05387 are separated by 104 nucleotidesGEMAOFIL_05387 and GEMAOFIL_05388 are separated by 537 nucleotidesGEMAOFIL_05388 and GEMAOFIL_05389 are separated by 415 nucleotidesGEMAOFIL_05389 and GEMAOFIL_05390 are separated by 68 nucleotidesGEMAOFIL_05390 and GEMAOFIL_05391 overlap by 4 nucleotidesGEMAOFIL_05391 and GEMAOFIL_05392 are separated by 141 nucleotides GEMAOFIL_05382: GEMAOFIL_05382 - 3-keto-5-aminohexanoate cleavage enzyme, at 5,906,824 to 5,907,711 _05382 GEMAOFIL_05383: GEMAOFIL_05383 - L-carnitine dehydrogenase, at 5,907,760 to 5,908,725 _05383 GEMAOFIL_05384: GEMAOFIL_05384 - L-carnitine dehydrogenase, at 5,908,776 to 5,909,252 _05384 GEMAOFIL_05385: GEMAOFIL_05385 - Gamma-butyrobetaine dioxygenase, at 5,909,265 to 5,910,416 _05385 GEMAOFIL_05386: GEMAOFIL_05386 - hypothetical protein, at 5,911,418 to 5,911,681 _05386 GEMAOFIL_05387: GEMAOFIL_05387 - HTH-type transcriptional regulator CdhR, at 5,911,786 to 5,912,889 _05387 GEMAOFIL_05388: GEMAOFIL_05388 - L-serine dehydratase 2, at 5,913,427 to 5,914,803 _05388 GEMAOFIL_05389: GEMAOFIL_05389 - hypothetical protein, at 5,915,219 to 5,916,166 _05389 GEMAOFIL_05390: GEMAOFIL_05390 - Glycine betaine transport system permease protein OpuAB, at 5,916,235 to 5,917,080 _05390 GEMAOFIL_05391: GEMAOFIL_05391 - Vitamin B12 import ATP-binding protein BtuD, at 5,917,077 to 5,918,255 _05391 GEMAOFIL_05392: GEMAOFIL_05392 - L-carnitine/gamma-butyrobetaine antiporter, at 5,918,397 to 5,920,388 _05392
Locus Name Description Strand Phenotype
GEMAOFIL_05382 GEMAOFIL_05382 3-keto-5-aminohexanoate cleavage enzyme + cofit
GEMAOFIL_05383 GEMAOFIL_05383 L-carnitine dehydrogenase + cofit
GEMAOFIL_05384 GEMAOFIL_05384 L-carnitine dehydrogenase + no data
GEMAOFIL_05385 GEMAOFIL_05385 Gamma-butyrobetaine dioxygenase + insig.
GEMAOFIL_05386 GEMAOFIL_05386 hypothetical protein + cofit
GEMAOFIL_05387 GEMAOFIL_05387 HTH-type transcriptional regulator CdhR - cofit
GEMAOFIL_05388 GEMAOFIL_05388 L-serine dehydratase 2 - cofit
GEMAOFIL_05389 GEMAOFIL_05389 hypothetical protein + cofit
GEMAOFIL_05390 GEMAOFIL_05390 Glycine betaine transport system permease protein OpuAB + insig.
GEMAOFIL_05391 GEMAOFIL_05391 Vitamin B12 import ATP-binding protein BtuD + cofit
GEMAOFIL_05392 GEMAOFIL_05392 L-carnitine/gamma-butyrobetaine antiporter - insig.

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