Gene info for Echvi_3848 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): N-succinylornithine aminotransferase (EC 2.6.1.81)
Rationale: Important for fitness in most defined media, except when arginine or citrulline is provided. Similar to acetylornithine aminotransferases (such as argD from B. subtilis), but Bacteroidetes use succinylated intermediates for arginine synthesis (see PMC7311316).
Original annotation: Ornithine/acetylornithine aminotransferase
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, + strand, nucleotides 4,598,764 to 4,599,909
See nucleotide sequence around Echvi_3848 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0G5F2

Nearby Genes

500 ntEchvi_3843 and Echvi_3844 overlap by 4 nucleotidesEchvi_3844 and Echvi_3845 are separated by 144 nucleotidesEchvi_3845 and Echvi_3846 are separated by 9 nucleotidesEchvi_3846 and Echvi_3847 overlap by 8 nucleotidesEchvi_3847 and Echvi_3848 are separated by 49 nucleotidesEchvi_3848 and Echvi_3849 are separated by 144 nucleotidesEchvi_3849 and Echvi_3850 are separated by 32 nucleotidesEchvi_3850 and Echvi_3851 are separated by 63 nucleotidesEchvi_3851 and Echvi_3852 are separated by 188 nucleotidesEchvi_3852 and Echvi_3853 are separated by 346 nucleotides Echvi_3843: Echvi_3843 - hypothetical protein, at 4,595,490 to 4,595,609 _3843 Echvi_3844: Echvi_3844 - hypothetical protein, at 4,595,606 to 4,595,725 _3844 Echvi_3845: Echvi_3845 - N-succinylglutamate synthase (from data), at 4,595,870 to 4,596,544 _3845 Echvi_3846: Echvi_3846 - argininosuccinate synthase, at 4,596,554 to 4,597,753 _3846 Echvi_3847: Echvi_3847 - N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data), at 4,597,746 to 4,598,714 _3847 Echvi_3848: Echvi_3848 - N-succinylornithine aminotransferase (EC 2.6.1.81) (from data), at 4,598,764 to 4,599,909 _3848 Echvi_3849: Echvi_3849 - N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data), at 4,600,054 to 4,600,995 _3849 Echvi_3850: Echvi_3850 - acetylglutamate kinase, at 4,601,028 to 4,601,828 _3850 Echvi_3851: Echvi_3851 - N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data), at 4,601,892 to 4,602,980 _3851 Echvi_3852: Echvi_3852 - arginosuccinate lyase (EC 4.3.2.1) (from data), at 4,603,169 to 4,604,503 _3852 Echvi_3853: Echvi_3853 - Predicted transcriptional regulators, at 4,604,850 to 4,605,260 _3853
Locus Name Description Strand Phenotype
Echvi_3843 Echvi_3843 hypothetical protein + no data
Echvi_3844 Echvi_3844 hypothetical protein + insig.
Echvi_3845 Echvi_3845 N-succinylglutamate synthase (from data) + strong
Echvi_3846 Echvi_3846 argininosuccinate synthase + strong
Echvi_3847 Echvi_3847 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) + strong
Echvi_3848 Echvi_3848 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) + strong
Echvi_3849 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) + strong
Echvi_3850 Echvi_3850 acetylglutamate kinase + strong
Echvi_3851 Echvi_3851 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) + strong
Echvi_3852 Echvi_3852 arginosuccinate lyase (EC 4.3.2.1) (from data) + strong
Echvi_3853 Echvi_3853 Predicted transcriptional regulators + strong

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