Gene info for Echvi_3833 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): 2-isopropylmalate synthase (EC 2.3.3.13)
Rationale: Important for fitness in defined media unless leucine is provided. 55% identical to 2-isopropylmalate synthase from Leptospira interrogans (Q8F445).
Original annotation: Isopropylmalate/homocitrate/citramalate synthases
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, + strand, nucleotides 4,580,297 to 4,581,469
See nucleotide sequence around Echvi_3833 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0G5E1

Nearby Genes

500 ntEchvi_3828 and Echvi_3829 are separated by 140 nucleotidesEchvi_3829 and Echvi_3830 are separated by 47 nucleotidesEchvi_3830 and Echvi_3831 are separated by 17 nucleotidesEchvi_3831 and Echvi_3832 are separated by 252 nucleotidesEchvi_3832 and Echvi_3833 are separated by 143 nucleotidesEchvi_3833 and Echvi_3834 are separated by 85 nucleotidesEchvi_3834 and Echvi_3835 are separated by 1262 nucleotidesEchvi_3835 and Echvi_3836 are separated by 660 nucleotidesEchvi_3836 and Echvi_3837 are separated by 206 nucleotidesEchvi_3837 and Echvi_3838 are separated by 93 nucleotides Echvi_3828: Echvi_3828 - Response regulator of the LytR/AlgR family, at 4,575,153 to 4,575,884 _3828 Echvi_3829: Echvi_3829 - Cytosine/adenosine deaminases, at 4,576,025 to 4,576,501 _3829 Echvi_3830: Echvi_3830 - Glutamate decarboxylase and related PLP-dependent proteins, at 4,576,549 to 4,577,925 _3830 Echvi_3831: Echvi_3831 - hypothetical protein, at 4,577,943 to 4,578,344 _3831 Echvi_3832: Echvi_3832 - hypothetical protein, at 4,578,597 to 4,580,153 _3832 Echvi_3833: Echvi_3833 - 2-isopropylmalate synthase (EC 2.3.3.13) (from data), at 4,580,297 to 4,581,469 _3833 Echvi_3834: Echvi_3834 - signal recognition particle protein, at 4,581,555 to 4,582,895 _3834 Echvi_3835: Echvi_3835 - hypothetical protein, at 4,584,158 to 4,584,685 _3835 Echvi_3836: Echvi_3836 - FOG: Transposase and inactivated derivatives, at 4,585,346 to 4,586,578 _3836 Echvi_3837: Echvi_3837 - chromosome segregation protein SMC, common bacterial type, at 4,586,785 to 4,590,339 _3837 Echvi_3838: Echvi_3838 - Fe-S oxidoreductase, at 4,590,433 to 4,592,607 _3838
Locus Name Description Strand Phenotype
Echvi_3828 Echvi_3828 Response regulator of the LytR/AlgR family + insig.
Echvi_3829 Echvi_3829 Cytosine/adenosine deaminases + insig.
Echvi_3830 Echvi_3830 Glutamate decarboxylase and related PLP-dependent proteins + insig.
Echvi_3831 Echvi_3831 hypothetical protein - insig.
Echvi_3832 Echvi_3832 hypothetical protein - strong
Echvi_3833 Echvi_3833 2-isopropylmalate synthase (EC 2.3.3.13) (from data) + strong
Echvi_3834 Echvi_3834 signal recognition particle protein - no data
Echvi_3835 Echvi_3835 hypothetical protein - insig.
Echvi_3836 Echvi_3836 FOG: Transposase and inactivated derivatives + no data
Echvi_3837 Echvi_3837 chromosome segregation protein SMC, common bacterial type + insig.
Echvi_3838 Echvi_3838 Fe-S oxidoreductase - insig.

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