Gene info for Echvi_2850 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): Alpha-amylase (EC 3.2.1.1)
Rationale: Specifically important for utilizing a-Cyclodextrin. Automated validation from mutant phenotype: the predicted function (3.2.1.1) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: Glycosidases
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, + strand, nucleotides 3,416,517 to 3,418,076
See nucleotide sequence around Echvi_2850 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0FYW1

Nearby Genes

500 ntEchvi_2845 and Echvi_2846 are separated by 366 nucleotidesEchvi_2846 and Echvi_2847 are separated by 19 nucleotidesEchvi_2847 and Echvi_2848 are separated by 19 nucleotidesEchvi_2848 and Echvi_2849 are separated by 378 nucleotidesEchvi_2849 and Echvi_2850 are separated by 292 nucleotidesEchvi_2850 and Echvi_2851 are separated by 499 nucleotidesEchvi_2851 and Echvi_2852 are separated by 288 nucleotidesEchvi_2852 and Echvi_2853 are separated by 196 nucleotidesEchvi_2853 and Echvi_2854 are separated by 236 nucleotidesEchvi_2854 and Echvi_2855 are separated by 30 nucleotides Echvi_2845: Echvi_2845 - Transcriptional regulators, at 3,407,748 to 3,408,782 _2845 Echvi_2846: Echvi_2846 - TonB-linked outer membrane protein, SusC/RagA family, at 3,409,149 to 3,412,115 _2846 Echvi_2847: Echvi_2847 - SusD family., at 3,412,135 to 3,413,724 _2847 Echvi_2848: Echvi_2848 - hypothetical protein, at 3,413,744 to 3,414,784 _2848 Echvi_2849: Echvi_2849 - fructose-bisphosphate aldolase, class II, yeast/E. coli subtype, at 3,415,163 to 3,416,224 _2849 Echvi_2850: Echvi_2850 - Alpha-amylase (EC 3.2.1.1) (from data), at 3,416,517 to 3,418,076 _2850 Echvi_2851: Echvi_2851 - hypothetical protein, at 3,418,576 to 3,419,085 _2851 Echvi_2852: Echvi_2852 - RNA polymerase sigma-70 factor, Bacteroides expansion family 1, at 3,419,374 to 3,419,919 _2852 Echvi_2853: Echvi_2853 - Fe2+-dicitrate sensor, membrane component, at 3,420,116 to 3,421,072 _2853 Echvi_2854: Echvi_2854 - TonB-linked outer membrane protein, SusC/RagA family, at 3,421,309 to 3,424,761 _2854 Echvi_2855: Echvi_2855 - hypothetical protein, at 3,424,792 to 3,426,261 _2855
Locus Name Description Strand Phenotype
Echvi_2845 Echvi_2845 Transcriptional regulators - strong
Echvi_2846 Echvi_2846 TonB-linked outer membrane protein, SusC/RagA family + sig.
Echvi_2847 Echvi_2847 SusD family. + insig.
Echvi_2848 Echvi_2848 hypothetical protein + insig.
Echvi_2849 Echvi_2849 fructose-bisphosphate aldolase, class II, yeast/E. coli subtype + no data
Echvi_2850 Echvi_2850 Alpha-amylase (EC 3.2.1.1) (from data) + strong
Echvi_2851 Echvi_2851 hypothetical protein + insig.
Echvi_2852 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 + strong
Echvi_2853 Echvi_2853 Fe2+-dicitrate sensor, membrane component + sig.
Echvi_2854 Echvi_2854 TonB-linked outer membrane protein, SusC/RagA family + strong
Echvi_2855 Echvi_2855 hypothetical protein + strong

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