Gene info for Echvi_2275 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): translesion DNA polymerase (imuC-like)
Rationale: Specifically important in stress Cisplatin. Distantly related (less than 30% identity) to imuC (also known as dnaE2), which is a translesion DNA polymerase that is involved in DNA repair in Pseudomonas and Mycobacteria (see PMC3090020).
Original annotation: DNA polymerase III, alpha subunit
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, - strand, nucleotides 2,693,898 to 2,696,906
See nucleotide sequence around Echvi_2275 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0FZU0

Nearby Genes

500 ntEchvi_2270 and Echvi_2271 overlap by 8 nucleotidesEchvi_2271 and Echvi_2272 are separated by 79 nucleotidesEchvi_2272 and Echvi_2273 are separated by 164 nucleotidesEchvi_2273 and Echvi_2274 are separated by 133 nucleotidesEchvi_2274 and Echvi_2275 are separated by 25 nucleotidesEchvi_2275 and Echvi_2276 are separated by 83 nucleotidesEchvi_2276 and Echvi_2277 are separated by 21 nucleotidesEchvi_2277 and Echvi_2278 are separated by 168 nucleotidesEchvi_2278 and Echvi_2279 are separated by 5 nucleotidesEchvi_2279 and Echvi_2280 are separated by 130 nucleotides Echvi_2270: Echvi_2270 - His Kinase A (phosphoacceptor) domain./7TM diverse intracellular signalling./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 2,687,829 to 2,690,024 _2270 Echvi_2271: Echvi_2271 - His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 2,690,017 to 2,691,099 _2271 Echvi_2272: Echvi_2272 - Uncharacterized conserved protein, at 2,691,179 to 2,691,898 _2272 Echvi_2273: Echvi_2273 - Inorganic pyrophosphatase, at 2,692,063 to 2,692,602 _2273 Echvi_2274: Echvi_2274 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,692,736 to 2,693,872 _2274 Echvi_2275: Echvi_2275 - translesion DNA polymerase (imuC-like) (from data), at 2,693,898 to 2,696,906 _2275 Echvi_2276: Echvi_2276 - Cysteine-rich domain., at 2,696,990 to 2,697,505 _2276 Echvi_2277: Echvi_2277 - Choline-glycine betaine transporter, at 2,697,527 to 2,699,065 _2277 Echvi_2278: Echvi_2278 - Uncharacterized conserved protein, at 2,699,234 to 2,700,280 _2278 Echvi_2279: Echvi_2279 - Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase, at 2,700,286 to 2,701,161 _2279 Echvi_2280: Echvi_2280 - hypothetical protein, at 2,701,292 to 2,701,747 _2280
Locus Name Description Strand Phenotype
Echvi_2270 Echvi_2270 His Kinase A (phosphoacceptor) domain./7TM diverse intracellular signalling./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. + sig.
Echvi_2271 Echvi_2271 His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. + strong
Echvi_2272 Echvi_2272 Uncharacterized conserved protein - insig.
Echvi_2273 Echvi_2273 Inorganic pyrophosphatase + no data
Echvi_2274 Echvi_2274 1-acyl-sn-glycerol-3-phosphate acyltransferase + strong
Echvi_2275 Echvi_2275 translesion DNA polymerase (imuC-like) (from data) - strong
Echvi_2276 Echvi_2276 Cysteine-rich domain. + strong
Echvi_2277 Echvi_2277 Choline-glycine betaine transporter - insig.
Echvi_2278 Echvi_2278 Uncharacterized conserved protein + insig.
Echvi_2279 Echvi_2279 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + insig.
Echvi_2280 Echvi_2280 hypothetical protein - insig.

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