Gene info for Echvi_1842 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): 3-ketohexose dehydratase
Rationale: Important for utilizing various glycosides (salicin, trehalose, cellobiose, and lactose). In a conserved cluster with the 3-ketoglycoside pathway starting with lacAC. 67% identical to the Agrobacterium enzyme (AtHyd, PMC10628242). The role in beta-lactose utilization suggests that it is a 3-ketogalactose dehydratase as well as a 3-ketoglucose dehydratase..
Original annotation: Sugar phosphate isomerases/epimerases
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, - strand, nucleotides 2,157,973 to 2,159,025
See nucleotide sequence around Echvi_1842 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0FZD3

Nearby Genes

500 ntEchvi_1837 and Echvi_1838 are separated by 107 nucleotidesEchvi_1838 and Echvi_1839 are separated by 38 nucleotidesEchvi_1839 and Echvi_1840 are separated by 121 nucleotidesEchvi_1840 and Echvi_1841 are separated by 53 nucleotidesEchvi_1841 and Echvi_1842 are separated by 27 nucleotidesEchvi_1842 and Echvi_1843 are separated by 43 nucleotidesEchvi_1843 and Echvi_1844 overlap by 147 nucleotidesEchvi_1844 and Echvi_1845 are separated by 284 nucleotidesEchvi_1845 and Echvi_1846 are separated by 42 nucleotidesEchvi_1846 and Echvi_1847 are separated by 34 nucleotides Echvi_1837: Echvi_1837 - hypothetical protein, at 2,152,932 to 2,154,020 _1837 Echvi_1838: Echvi_1838 - hypothetical protein, at 2,154,128 to 2,154,259 _1838 Echvi_1839: Echvi_1839 - isocitrate dehydrogenase, NADP-dependent, monomeric type, at 2,154,298 to 2,156,586 _1839 Echvi_1840: Echvi_1840 - Domain of Unknown Function (DUF1080)., at 2,156,708 to 2,157,466 _1840 Echvi_1841: Echvi_1841 - predicted cytochrome c component of periplasmic glycoside 3-dehydrogenase (EC 1.1.99.13) (from data), at 2,157,520 to 2,157,945 _1841 Echvi_1842: Echvi_1842 - 3-ketohexose dehydratase (from data), at 2,157,973 to 2,159,025 _1842 Echvi_1843: Echvi_1843 - hypothetical protein, at 2,159,069 to 2,159,359 _1843 Echvi_1844: Echvi_1844 - 3-ketohexose reductase (NADH) (from data), at 2,159,213 to 2,160,382 _1844 Echvi_1845: Echvi_1845 - 2-hydroxy-3-keto-glucal transporter (from data), at 2,160,667 to 2,161,899 _1845 Echvi_1846: Echvi_1846 - 3-keto-beta-glycoside 1,2-lyase (from data), at 2,161,942 to 2,162,775 _1846 Echvi_1847: Echvi_1847 - periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) (from data), at 2,162,810 to 2,164,489 _1847
Locus Name Description Strand Phenotype
Echvi_1837 Echvi_1837 hypothetical protein - insig.
Echvi_1838 Echvi_1838 hypothetical protein - sig.
Echvi_1839 Echvi_1839 isocitrate dehydrogenase, NADP-dependent, monomeric type + no data
Echvi_1840 Echvi_1840 Domain of Unknown Function (DUF1080). - sig.
Echvi_1841 Echvi_1841 predicted cytochrome c component of periplasmic glycoside 3-dehydrogenase (EC 1.1.99.13) (from data) - strong
Echvi_1842 Echvi_1842 3-ketohexose dehydratase (from data) - strong
Echvi_1843 Echvi_1843 hypothetical protein + no data
Echvi_1844 Echvi_1844 3-ketohexose reductase (NADH) (from data) - sig.
Echvi_1845 Echvi_1845 2-hydroxy-3-keto-glucal transporter (from data) + strong
Echvi_1846 Echvi_1846 3-keto-beta-glycoside 1,2-lyase (from data) + strong
Echvi_1847 Echvi_1847 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) (from data) + strong

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