Gene info for Echvi_0503 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Rationale: Specifically important for utilizing L-Arabinose. Automated validation from mutant phenotype: the predicted function (RIBULPEPIM-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, - strand, nucleotides 560,214 to 560,918
See nucleotide sequence around Echvi_0503 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0FU07

Nearby Genes

500 ntEchvi_0498 and Echvi_0499 are separated by 191 nucleotidesEchvi_0499 and Echvi_0500 are separated by 282 nucleotidesEchvi_0500 and Echvi_0501 are separated by 72 nucleotidesEchvi_0501 and Echvi_0502 are separated by 318 nucleotidesEchvi_0502 and Echvi_0503 are separated by 87 nucleotidesEchvi_0503 and Echvi_0504 are separated by 321 nucleotidesEchvi_0504 and Echvi_0505 are separated by 4 nucleotidesEchvi_0505 and Echvi_0506 overlap by 10 nucleotidesEchvi_0506 and Echvi_0507 are separated by 263 nucleotidesEchvi_0507 and Echvi_0508 are separated by 305 nucleotides Echvi_0498: Echvi_0498 - hypothetical protein, at 554,629 to 555,726 _0498 Echvi_0499: Echvi_0499 - Glycosyl hydrolases family 43., at 555,918 to 556,859 _0499 Echvi_0500: Echvi_0500 - Beta-xylosidase, at 557,142 to 558,122 _0500 Echvi_0501: Echvi_0501 - ADP-ribose pyrophosphatase, at 558,195 to 558,647 _0501 Echvi_0502: Echvi_0502 - Galactose mutarotase and related enzymes, at 558,966 to 560,126 _0502 Echvi_0503: Echvi_0503 - L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (from data), at 560,214 to 560,918 _0503 Echvi_0504: Echvi_0504 - Signal transduction histidine kinase, at 561,240 to 564,401 _0504 Echvi_0505: Echvi_0505 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 564,406 to 564,996 _0505 Echvi_0506: Echvi_0506 - Predicted neuraminidase (sialidase), at 564,987 to 566,087 _0506 Echvi_0507: Echvi_0507 - Threonine dehydrogenase and related Zn-dependent dehydrogenases, at 566,351 to 567,364 _0507 Echvi_0508: Echvi_0508 - L-fucose:H+ symporter permease, at 567,670 to 568,965 _0508
Locus Name Description Strand Phenotype
Echvi_0498 Echvi_0498 hypothetical protein - insig.
Echvi_0499 Echvi_0499 Glycosyl hydrolases family 43. + insig.
Echvi_0500 Echvi_0500 Beta-xylosidase + insig.
Echvi_0501 Echvi_0501 ADP-ribose pyrophosphatase - insig.
Echvi_0502 Echvi_0502 Galactose mutarotase and related enzymes - insig.
Echvi_0503 Echvi_0503 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (from data) - strong
Echvi_0504 Echvi_0504 Signal transduction histidine kinase + insig.
Echvi_0505 Echvi_0505 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + insig.
Echvi_0506 Echvi_0506 Predicted neuraminidase (sialidase) - insig.
Echvi_0507 Echvi_0507 Threonine dehydrogenase and related Zn-dependent dehydrogenases - insig.
Echvi_0508 Echvi_0508 L-fucose:H+ symporter permease - insig.

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