Gene info for Echvi_0120 in Echinicola vietnamensis KMM 6221, DSM 17526

Updated annotation (from data): 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase / chorismate mutase (EC 2.5.1.54; EC 5.4.99.5)
Rationale: Important for fitness in most defined media. The N-terminal DHAP region is only 33% identical to the Pyrococcus enzyme (Q8U0A9) but the active site and substrate-binding residues are conserved. The C-terminal chorismate mutase region is diverged but hits PF01817 and no other chorismate mutase was found in the genome.
Original annotation: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Type 1: Protein-coding gene
Located on scaffold Echvi_Contig97.1, + strand, nucleotides 119,948 to 121,051
See nucleotide sequence around Echvi_0120 or for all of scaffold Echvi_Contig97.1

Other databases: NCBI, uniprot: L0FSZ3

Nearby Genes

500 ntEchvi_0115 and Echvi_0116 are separated by 94 nucleotidesEchvi_0116 and Echvi_0117 are separated by 200 nucleotidesEchvi_0117 and Echvi_0118 are separated by 98 nucleotidesEchvi_0118 and Echvi_0119 are separated by 17 nucleotidesEchvi_0119 and Echvi_0120 are separated by 546 nucleotidesEchvi_0120 and Echvi_0121 are separated by 25 nucleotidesEchvi_0121 and Echvi_0122 overlap by 4 nucleotidesEchvi_0122 and Echvi_0123 are separated by 115 nucleotidesEchvi_0123 and Echvi_0124 are separated by 5 nucleotidesEchvi_0124 and Echvi_0125 are separated by 22 nucleotides Echvi_0115: Echvi_0115 - hypothetical protein, at 110,035 to 112,797 _0115 Echvi_0116: Echvi_0116 - Arginine deiminase, at 112,892 to 114,109 _0116 Echvi_0117: Echvi_0117 - Predicted metalloendopeptidase, at 114,310 to 116,370 _0117 Echvi_0118: Echvi_0118 - Lysyl-tRNA synthetase (class II), at 116,469 to 118,187 _0118 Echvi_0119: Echvi_0119 - Proline dehydrogenase (EC 1.5.5.2) (from data), at 118,205 to 119,401 _0119 Echvi_0120: Echvi_0120 - 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase / chorismate mutase (EC 2.5.1.54; EC 5.4.99.5) (from data), at 119,948 to 121,051 _0120 Echvi_0121: Echvi_0121 - 3-dehydroquinate synthase, at 121,077 to 122,114 _0121 Echvi_0122: Echvi_0122 - 5-enolpyruvylshikimate-3-phosphate synthase, at 122,111 to 123,328 _0122 Echvi_0123: Echvi_0123 - prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data), at 123,444 to 124,283 _0123 Echvi_0124: Echvi_0124 - Aspartate/tyrosine/aromatic aminotransferase, at 124,289 to 125,449 _0124 Echvi_0125: Echvi_0125 - Prephenate dehydrogenase, at 125,472 to 126,320 _0125
Locus Name Description Strand Phenotype
Echvi_0115 Echvi_0115 hypothetical protein + no data
Echvi_0116 Echvi_0116 Arginine deiminase - sig.
Echvi_0117 Echvi_0117 Predicted metalloendopeptidase - insig.
Echvi_0118 Echvi_0118 Lysyl-tRNA synthetase (class II) - no data
Echvi_0119 Echvi_0119 Proline dehydrogenase (EC 1.5.5.2) (from data) - strong
Echvi_0120 Echvi_0120 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase / chorismate mutase (EC 2.5.1.54; EC 5.4.99.5) (from data) + strong
Echvi_0121 Echvi_0121 3-dehydroquinate synthase + no data
Echvi_0122 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase + no data
Echvi_0123 Echvi_0123 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) + strong
Echvi_0124 Echvi_0124 Aspartate/tyrosine/aromatic aminotransferase + strong
Echvi_0125 Echvi_0125 Prephenate dehydrogenase + strong

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