Gene info for DZA65_RS18035 in Dickeya dianthicola ME23

Annotation: tRNA pseudouridine(13) synthase TruD
Type 1: Protein-coding gene
Located on scaffold NZ_CP031560, - strand, nucleotides 3,881,007 to 3,882,056
See nucleotide sequence around DZA65_RS18035 or for all of scaffold NZ_CP031560

Other databases: NCBI, uniprot: A0A385Y1Q1

Nearby Genes

500 ntDZA65_RS18010 and DZA65_RS18015 are separated by 115 nucleotidesDZA65_RS18015 and DZA65_RS18020 are separated by 94 nucleotidesDZA65_RS18020 and DZA65_RS18025 are separated by 53 nucleotidesDZA65_RS18025 and DZA65_RS18030 are separated by 306 nucleotidesDZA65_RS18030 and DZA65_RS18035 are separated by 121 nucleotidesDZA65_RS18035 and DZA65_RS18040 overlap by 7 nucleotidesDZA65_RS18040 and DZA65_RS18045 are separated by 3 nucleotidesDZA65_RS18045 and DZA65_RS18050 are separated by 2 nucleotidesDZA65_RS18050 and DZA65_RS18055 are separated by 215 nucleotidesDZA65_RS18055 and DZA65_RS18060 are separated by 121 nucleotides DZA65_RS18010: DZA65_RS18010 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO, at 3,875,044 to 3,875,751 _RS18010 DZA65_RS18015: DZA65_RS18015 - proline--tRNA ligase, at 3,875,867 to 3,877,585 _RS18015 DZA65_RS18020: DZA65_RS18020 - RNA polymerase sigma factor RpoS, at 3,877,680 to 3,878,672 _RS18020 DZA65_RS18025: DZA65_RS18025 - murein hydrolase activator NlpD, at 3,878,726 to 3,879,952 _RS18025 DZA65_RS18030: DZA65_RS18030 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 3,880,259 to 3,880,885 _RS18030 DZA65_RS18035: DZA65_RS18035 - tRNA pseudouridine(13) synthase TruD, at 3,881,007 to 3,882,056 _RS18035 DZA65_RS18040: DZA65_RS18040 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,882,050 to 3,882,547 _RS18040 DZA65_RS18045: DZA65_RS18045 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,882,551 to 3,883,279 _RS18045 DZA65_RS18050: DZA65_RS18050 - cell division protein FtsB, at 3,883,282 to 3,883,620 _RS18050 DZA65_RS18055: DZA65_RS18055 - DUF3561 family protein, at 3,883,836 to 3,884,189 _RS18055 DZA65_RS18060: DZA65_RS18060 - adenylyl-sulfate kinase, at 3,884,311 to 3,884,934 _RS18060
Locus Name Description Strand Phenotype
DZA65_RS18010 DZA65_RS18010 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO + insig.
DZA65_RS18015 DZA65_RS18015 proline--tRNA ligase + no data
DZA65_RS18020 DZA65_RS18020 RNA polymerase sigma factor RpoS - sig.
DZA65_RS18025 DZA65_RS18025 murein hydrolase activator NlpD - no data
DZA65_RS18030 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase - cofit
DZA65_RS18035 DZA65_RS18035 tRNA pseudouridine(13) synthase TruD - insig.
DZA65_RS18040 DZA65_RS18040 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - no data
DZA65_RS18045 DZA65_RS18045 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - no data
DZA65_RS18050 DZA65_RS18050 cell division protein FtsB - no data
DZA65_RS18055 DZA65_RS18055 DUF3561 family protein - insig.
DZA65_RS18060 DZA65_RS18060 adenylyl-sulfate kinase - strong

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