Gene info for DZA65_RS08540 in Dickeya dianthicola ME23

Annotation: type VI secretion system contractile sheath small subunit
Type 1: Protein-coding gene
Located on scaffold NZ_CP031560, + strand, nucleotides 1,802,824 to 1,803,327
See nucleotide sequence around DZA65_RS08540 or for all of scaffold NZ_CP031560

Other databases: NCBI, uniprot: A0A3A4CYK7

Nearby Genes

500 ntDZA65_RS08515 and DZA65_RS08520 are separated by 93 nucleotidesDZA65_RS08520 and DZA65_RS08525 are separated by 124 nucleotidesDZA65_RS08525 and DZA65_RS08530 are separated by 32 nucleotidesDZA65_RS08530 and DZA65_RS08535 are separated by 187 nucleotidesDZA65_RS08535 and DZA65_RS08540 are separated by 970 nucleotidesDZA65_RS08540 and DZA65_RS08545 are separated by 31 nucleotidesDZA65_RS08545 and DZA65_RS08550 are separated by 6 nucleotidesDZA65_RS08550 and DZA65_RS08555 are separated by 2 nucleotidesDZA65_RS08555 and DZA65_RS08560 overlap by 37 nucleotidesDZA65_RS08560 and DZA65_RS08565 are separated by 2 nucleotides DZA65_RS08515: DZA65_RS08515 - efflux RND transporter periplasmic adaptor subunit, at 1,796,537 to 1,797,652 _RS08515 DZA65_RS08520: DZA65_RS08520 - TetR/AcrR family transcriptional regulator, at 1,797,746 to 1,798,363 _RS08520 DZA65_RS08525: DZA65_RS08525 - efflux transporter outer membrane subunit, at 1,798,488 to 1,799,966 _RS08525 DZA65_RS08530: DZA65_RS08530 - MATE family efflux transporter, at 1,799,999 to 1,801,408 _RS08530 DZA65_RS08535: DZA65_RS08535 - amidohydrolase, at 1,801,596 to 1,801,853 _RS08535 DZA65_RS08540: DZA65_RS08540 - type VI secretion system contractile sheath small subunit, at 1,802,824 to 1,803,327 _RS08540 DZA65_RS08545: DZA65_RS08545 - type VI secretion system contractile sheath large subunit, at 1,803,359 to 1,804,837 _RS08545 DZA65_RS08550: DZA65_RS08550 - type VI secretion system baseplate subunit TssE, at 1,804,844 to 1,805,275 _RS08550 DZA65_RS08555: DZA65_RS08555 - type VI secretion system baseplate subunit TssF, at 1,805,278 to 1,807,044 _RS08555 DZA65_RS08560: DZA65_RS08560 - type VI secretion system baseplate subunit TssG, at 1,807,008 to 1,808,021 _RS08560 DZA65_RS08565: DZA65_RS08565 - type VI secretion system-associated FHA domain protein TagH, at 1,808,024 to 1,809,253 _RS08565
Locus Name Description Strand Phenotype
DZA65_RS08515 DZA65_RS08515 efflux RND transporter periplasmic adaptor subunit - insig.
DZA65_RS08520 DZA65_RS08520 TetR/AcrR family transcriptional regulator - no data
DZA65_RS08525 DZA65_RS08525 efflux transporter outer membrane subunit + insig.
DZA65_RS08530 DZA65_RS08530 MATE family efflux transporter + insig.
DZA65_RS08535 DZA65_RS08535 amidohydrolase + insig.
DZA65_RS08540 DZA65_RS08540 type VI secretion system contractile sheath small subunit + insig.
DZA65_RS08545 DZA65_RS08545 type VI secretion system contractile sheath large subunit + insig.
DZA65_RS08550 DZA65_RS08550 type VI secretion system baseplate subunit TssE + insig.
DZA65_RS08555 DZA65_RS08555 type VI secretion system baseplate subunit TssF + insig.
DZA65_RS08560 DZA65_RS08560 type VI secretion system baseplate subunit TssG + insig.
DZA65_RS08565 DZA65_RS08565 type VI secretion system-associated FHA domain protein TagH + insig.

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