Gene info for CA264_07430 in Pontibacter actiniarum KMM 6156, DSM 19842

Updated annotation (from data): DNA repair nuclease with dnaQ and GIY-YIG domains
Rationale: Specifically important in stress Cisplatin. Contains a domain that is similar to DnaQ (the epsilon subunit of replicative DNA polymerase which is the exonuclease for proofreading) as well as a GIY-YIG nuclease domain.This protein is often misannotated as DnaQ, but the proofreading activity of the replicative DNA polymerase seems to reside in the same polypeptide as the catalytic subunit (see discussion in PMC3919608).
Original annotation: DNA polymerase III subunit epsilon
Type 1: Protein-coding gene
Located on scaffold CP021235, + strand, nucleotides 1,714,141 to 1,715,556
See nucleotide sequence around CA264_07430 or for all of scaffold CP021235

Other databases: NCBI, uniprot: A0A1X9YXV0

Nearby Genes

500 ntCA264_07405 and CA264_07410 are separated by 171 nucleotidesCA264_07410 and CA264_07415 are separated by 66 nucleotidesCA264_07415 and CA264_07420 overlap by 8 nucleotidesCA264_07420 and CA264_07425 are separated by 348 nucleotidesCA264_07425 and CA264_07430 are separated by 132 nucleotidesCA264_07430 and CA264_07435 are separated by 42 nucleotidesCA264_07435 and CA264_07440 are separated by 381 nucleotidesCA264_07440 and CA264_07445 are separated by 50 nucleotidesCA264_07445 and CA264_07450 are separated by 27 nucleotidesCA264_07450 and CA264_07455 are separated by 195 nucleotides CA264_07405: CA264_07405 - hypothetical protein, at 1,705,806 to 1,706,885 _07405 CA264_07410: CA264_07410 - hypothetical protein, at 1,707,057 to 1,707,845 _07410 CA264_07415: CA264_07415 - DNA topoisomerase IV, at 1,707,912 to 1,710,665 _07415 CA264_07420: CA264_07420 - DNA topoisomerase IV, at 1,710,658 to 1,712,520 _07420 CA264_07425: CA264_07425 - AI-2E family transporter, at 1,712,869 to 1,714,008 _07425 CA264_07430: CA264_07430 - DNA repair nuclease with dnaQ and GIY-YIG domains (from data), at 1,714,141 to 1,715,556 _07430 CA264_07435: CA264_07435 - transporter permease, at 1,715,599 to 1,717,959 _07435 CA264_07440: CA264_07440 - class II fructose-bisphosphate aldolase, at 1,718,341 to 1,719,417 _07440 CA264_07445: CA264_07445 - phosphofructokinase, at 1,719,468 to 1,720,421 _07445 CA264_07450: CA264_07450 - trehalose-phosphatase, at 1,720,449 to 1,724,436 _07450 CA264_07455: CA264_07455 - hydrolase, at 1,724,632 to 1,725,408 _07455
Locus Name Description Strand Phenotype
CA264_07405 CA264_07405 hypothetical protein - sig.
CA264_07410 CA264_07410 hypothetical protein - strong
CA264_07415 CA264_07415 DNA topoisomerase IV - no data
CA264_07420 CA264_07420 DNA topoisomerase IV - no data
CA264_07425 CA264_07425 AI-2E family transporter + strong
CA264_07430 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) + strong
CA264_07435 CA264_07435 transporter permease - insig.
CA264_07440 CA264_07440 class II fructose-bisphosphate aldolase + no data
CA264_07445 CA264_07445 phosphofructokinase - insig.
CA264_07450 CA264_07450 trehalose-phosphatase - insig.
CA264_07455 CA264_07455 hydrolase - strong

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