Gene info for BNILDI_12410 in Escherichia coli ECRC62

Name: vapC
Annotation: VapC toxin family PIN domain ribonuclease
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 2,489,625 to 2,490,023
See nucleotide sequence around BNILDI_12410 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntdapA and bamC are separated by 16 nucleotidesbamC and BNILDI_12395 overlap by 90 nucleotidesBNILDI_12395 and purC are separated by 71 nucleotidespurC and vapB are separated by 115 nucleotidesvapB and vapC overlap by 1 nucleotidesvapC and ypfJ are separated by 146 nucleotidesypfJ and tmcA are separated by 14 nucleotidestmcA and ypfH are separated by 73 nucleotidesypfH and ypfN are separated by 109 nucleotidesypfN and dapE are separated by 27 nucleotides BNILDI_12385: dapA - 4-hydroxy-tetrahydrodipicolinate synthase, at 2,486,388 to 2,487,266 dapA BNILDI_12390: bamC - outer membrane protein assembly factor BamC, at 2,487,283 to 2,488,317 bamC BNILDI_12395: BNILDI_12395 - hypothetical protein, at 2,488,228 to 2,488,458 _12395 BNILDI_12400: purC - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 2,488,530 to 2,489,243 purC BNILDI_12405: vapB - toxin-antitoxin system antitoxin VapB, at 2,489,359 to 2,489,625 vapB BNILDI_12410: vapC - VapC toxin family PIN domain ribonuclease, at 2,489,625 to 2,490,023 vapC BNILDI_12415: ypfJ - Uncharacterized protein YpfJ, at 2,490,170 to 2,491,033 ypfJ BNILDI_12420: tmcA - tRNA cytosine(34) acetyltransferase TmcA, at 2,491,048 to 2,493,063 tmcA BNILDI_12425: ypfH - esterase, at 2,493,137 to 2,493,835 ypfH BNILDI_12440: ypfN - UPF0370 protein YpfN, at 2,493,945 to 2,494,145 ypfN BNILDI_12445: dapE - succinyl-diaminopimelate desuccinylase, at 2,494,173 to 2,495,300 dapE
Locus Name Description Strand Phenotype
BNILDI_12385 dapA 4-hydroxy-tetrahydrodipicolinate synthase + no data
BNILDI_12390 bamC outer membrane protein assembly factor BamC + cofit
BNILDI_12395 BNILDI_12395 hypothetical protein - no data
BNILDI_12400 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase + strong
BNILDI_12405 vapB toxin-antitoxin system antitoxin VapB + no data
BNILDI_12410 vapC VapC toxin family PIN domain ribonuclease + insig.
BNILDI_12415 ypfJ Uncharacterized protein YpfJ + cofit
BNILDI_12420 tmcA tRNA cytosine(34) acetyltransferase TmcA + cofit
BNILDI_12425 ypfH esterase + insig.
BNILDI_12440 ypfN UPF0370 protein YpfN - no data
BNILDI_12445 dapE succinyl-diaminopimelate desuccinylase - no data

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