Gene info for BNILDI_12250 in Escherichia coli ECRC62

Name: pdeF
Annotation: cyclic-guanylate-specific phosphodiesterase PdeF
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 2,457,408 to 2,459,651
See nucleotide sequence around BNILDI_12250 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntyfgH and tnp-IS3 are separated by 380 nucleotidestnp-IS3 and tnp-IS3 overlap by 4 nucleotidestnp-IS3 and yfgG are separated by 46 nucleotidesyfgG and BNILDI_12245 are separated by 35 nucleotidesBNILDI_12245 and pdeF are separated by 181 nucleotidespdeF and ppx are separated by 38 nucleotidesppx and ppk1 are separated by 4 nucleotidesppk1 and purN are separated by 170 nucleotidespurN and purM overlap by 1 nucleotidespurM and upp are separated by 324 nucleotides BNILDI_12225: yfgH - Uncharacterized lipoprotein YfgH, at 2,454,775 to 2,455,290 yfgH BNILDI_12230: tnp-IS3 - IS3 family transposase, at 2,455,671 to 2,456,537 tnp-IS3 BNILDI_12235: tnp-IS3 - IS3 family IS3 transposase, at 2,456,534 to 2,456,833 tnp-IS3 BNILDI_12240: yfgG - Uncharacterized protein YfgG, at 2,456,880 to 2,457,038 yfgG BNILDI_12245: BNILDI_12245 - hypothetical protein, at 2,457,074 to 2,457,226 _12245 BNILDI_12250: pdeF - cyclic-guanylate-specific phosphodiesterase PdeF, at 2,457,408 to 2,459,651 pdeF BNILDI_12255: ppx - exopolyphosphatase, at 2,459,690 to 2,461,231 ppx BNILDI_12260: ppk1 - polyphosphate kinase 1, at 2,461,236 to 2,463,302 ppk1 BNILDI_12265: purN - phosphoribosylglycinamide formyltransferase, at 2,463,473 to 2,464,111 purN BNILDI_12270: purM - Phosphoribosylformylglycinamidine cyclo-ligase, at 2,464,111 to 2,465,148 purM BNILDI_12275: upp - uracil phosphoribosyltransferase, at 2,465,473 to 2,466,099 upp
Locus Name Description Strand Phenotype
BNILDI_12225 yfgH Uncharacterized lipoprotein YfgH - insig.
BNILDI_12230 tnp-IS3 IS3 family transposase - no data
BNILDI_12235 tnp-IS3 IS3 family IS3 transposase - no data
BNILDI_12240 yfgG Uncharacterized protein YfgG - no data
BNILDI_12245 BNILDI_12245 hypothetical protein + cofit
BNILDI_12250 pdeF cyclic-guanylate-specific phosphodiesterase PdeF + cofit
BNILDI_12255 ppx exopolyphosphatase - cofit
BNILDI_12260 ppk1 polyphosphate kinase 1 - cofit
BNILDI_12265 purN phosphoribosylglycinamide formyltransferase - strong
BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase - strong
BNILDI_12275 upp uracil phosphoribosyltransferase + cofit

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