Gene info for BNILDI_10625 in Escherichia coli ECRC62

Name: rlmD
Annotation: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 2,146,594 to 2,147,895
See nucleotide sequence around BNILDI_10625 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntyqcA and gudP are separated by 434 nucleotidesgudP and gudX are separated by 1 nucleotidesgudX and gudD are separated by 20 nucleotidesgudD and barA are separated by 231 nucleotidesbarA and rlmD are separated by 56 nucleotidesrlmD and relA are separated by 47 nucleotidesrelA and mazE are separated by 77 nucleotidesmazE and mazF overlap by 1 nucleotidesmazF and mazG are separated by 70 nucleotidesmazG and pyrG are separated by 227 nucleotides BNILDI_10600: yqcA - flavodoxin, at 2,138,610 to 2,139,059 yqcA BNILDI_10605: gudP - galactarate/glucarate/glycerate transporter GudP, at 2,139,494 to 2,140,846 gudP BNILDI_10610: gudX - Glucarate dehydratase-related protein, at 2,140,848 to 2,142,188 gudX BNILDI_10615: gudD - glucarate dehydratase, at 2,142,209 to 2,143,549 gudD BNILDI_10620: barA - two-component sensor histidine kinase BarA, at 2,143,781 to 2,146,537 barA BNILDI_10625: rlmD - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 2,146,594 to 2,147,895 rlmD BNILDI_10630: relA - GTP diphosphokinase, at 2,147,943 to 2,150,177 relA BNILDI_10635: mazE - type II toxin-antitoxin system antitoxin MazE, at 2,150,255 to 2,150,503 mazE BNILDI_10640: mazF - endoribonuclease MazF, at 2,150,503 to 2,150,838 mazF BNILDI_10645: mazG - nucleoside triphosphate pyrophosphohydrolase, at 2,150,909 to 2,151,700 mazG BNILDI_10650: pyrG - CTP synthase (glutamine hydrolyzing), at 2,151,928 to 2,153,565 pyrG
Locus Name Description Strand Phenotype
BNILDI_10600 yqcA flavodoxin + insig.
BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP + cofit
BNILDI_10610 gudX Glucarate dehydratase-related protein + insig.
BNILDI_10615 gudD glucarate dehydratase + insig.
BNILDI_10620 barA two-component sensor histidine kinase BarA - cofit
BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD + cofit
BNILDI_10630 relA GTP diphosphokinase + strong
BNILDI_10635 mazE type II toxin-antitoxin system antitoxin MazE + insig.
BNILDI_10640 mazF endoribonuclease MazF + insig.
BNILDI_10645 mazG nucleoside triphosphate pyrophosphohydrolase + insig.
BNILDI_10650 pyrG CTP synthase (glutamine hydrolyzing) + no data

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