Gene info for AMB_RS04140 in Magnetospirillum magneticum AMB-1

Annotation: TRAP-type C4-dicarboxylate transport system
Type 1: Protein-coding gene
Located on scaffold NC_007626, - strand, nucleotides 867,413 to 868,528
See nucleotide sequence around AMB_RS04140 or for all of scaffold NC_007626

Other databases: NCBI, uniprot: Q2W961

Nearby Genes

500 ntAMB_RS04115 and AMB_RS04120 are separated by 5 nucleotidesAMB_RS04120 and AMB_RS04125 overlap by 4 nucleotidesAMB_RS04125 and AMB_RS04130 are separated by 18 nucleotidesAMB_RS04130 and AMB_RS04135 overlap by 4 nucleotidesAMB_RS04135 and AMB_RS04140 are separated by 34 nucleotidesAMB_RS04140 and AMB_RS04145 are separated by 109 nucleotidesAMB_RS04145 and AMB_RS04150 are separated by 7 nucleotidesAMB_RS04150 and AMB_RS04155 are separated by 126 nucleotidesAMB_RS04155 and AMB_RS04160 overlap by 4 nucleotidesAMB_RS04160 and AMB_RS04165 are separated by 133 nucleotides AMB_RS04115: AMB_RS04115 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, at 862,501 to 863,958 _RS04115 AMB_RS04120: AMB_RS04120 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, at 863,964 to 864,728 _RS04120 AMB_RS04125: AMB_RS04125 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase, at 864,725 to 865,501 _RS04125 AMB_RS04130: AMB_RS04130 - TRAP transporter large permease, at 865,520 to 866,848 _RS04130 AMB_RS04135: AMB_RS04135 - TRAP transporter small permease, at 866,845 to 867,378 _RS04135 AMB_RS04140: AMB_RS04140 - TRAP-type C4-dicarboxylate transport system, at 867,413 to 868,528 _RS04140 AMB_RS04145: AMB_RS04145 - homoprotocatechuate degradation operon regulator HpaR, at 868,638 to 869,129 _RS04145 AMB_RS04150: AMB_RS04150 - acetylornithine transaminase, at 869,137 to 870,303 _RS04150 AMB_RS04155: AMB_RS04155 - heme-binding protein, at 870,430 to 870,822 _RS04155 AMB_RS04160: AMB_RS04160 - NAD-dependent succinate-semialdehyde dehydrogenase, at 870,819 to 872,318 _RS04160 AMB_RS04165: AMB_RS04165 - homoprotocatechuate degradation operon regulator HpaR, at 872,452 to 872,919 _RS04165
Locus Name Description Strand Phenotype
AMB_RS04115 AMB_RS04115 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase - cofit
AMB_RS04120 AMB_RS04120 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase - cofit
AMB_RS04125 AMB_RS04125 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase - cofit
AMB_RS04130 AMB_RS04130 TRAP transporter large permease - cofit
AMB_RS04135 AMB_RS04135 TRAP transporter small permease - no data
AMB_RS04140 AMB_RS04140 TRAP-type C4-dicarboxylate transport system - insig.
AMB_RS04145 AMB_RS04145 homoprotocatechuate degradation operon regulator HpaR + cofit
AMB_RS04150 AMB_RS04150 acetylornithine transaminase + insig.
AMB_RS04155 AMB_RS04155 heme-binding protein - no data
AMB_RS04160 AMB_RS04160 NAD-dependent succinate-semialdehyde dehydrogenase - insig.
AMB_RS04165 AMB_RS04165 homoprotocatechuate degradation operon regulator HpaR + no data

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