Gene info for ABID97_RS19400 in Variovorax sp. OAS795

Annotation: LysR family transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, + strand, nucleotides 4,006,340 to 4,007,266
See nucleotide sequence around ABID97_RS19400 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS19375 and ABID97_RS19380 are separated by 38 nucleotidesABID97_RS19380 and ABID97_RS19385 are separated by 179 nucleotidesABID97_RS19385 and ABID97_RS19390 overlap by 59 nucleotidesABID97_RS19390 and ABID97_RS19395 are separated by 48 nucleotidesABID97_RS19395 and ABID97_RS19400 are separated by 101 nucleotidesABID97_RS19400 and ABID97_RS19405 are separated by 17 nucleotidesABID97_RS19405 and ABID97_RS19410 are separated by 32 nucleotidesABID97_RS19410 and ABID97_RS19415 are separated by 28 nucleotidesABID97_RS19415 and ABID97_RS19420 overlap by 4 nucleotidesABID97_RS19420 and ABID97_RS19425 overlap by 4 nucleotides ABID97_RS19375: ABID97_RS19375 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 3,998,686 to 4,000,143 _RS19375 ABID97_RS19380: ABID97_RS19380 - 2-methylcitrate synthase, at 4,000,182 to 4,001,348 _RS19380 ABID97_RS19385: ABID97_RS19385 - short-chain fatty acyl-CoA regulator family protein, at 4,001,528 to 4,003,039 _RS19385 ABID97_RS19390: ABID97_RS19390 - hypothetical protein, at 4,002,981 to 4,003,844 _RS19390 ABID97_RS19395: ABID97_RS19395 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 4,003,893 to 4,006,238 _RS19395 ABID97_RS19400: ABID97_RS19400 - LysR family transcriptional regulator, at 4,006,340 to 4,007,266 _RS19400 ABID97_RS19405: ABID97_RS19405 - 3-hydroxyisobutyrate dehydrogenase, at 4,007,284 to 4,008,177 _RS19405 ABID97_RS19410: ABID97_RS19410 - enoyl-CoA hydratase/isomerase family protein, at 4,008,210 to 4,009,325 _RS19410 ABID97_RS19415: ABID97_RS19415 - acyl-CoA dehydrogenase family protein, at 4,009,354 to 4,010,508 _RS19415 ABID97_RS19420: ABID97_RS19420 - lysozyme inhibitor LprI family protein, at 4,010,505 to 4,010,903 _RS19420 ABID97_RS19425: ABID97_RS19425 - CoA-acylating methylmalonate-semialdehyde dehydrogenase, at 4,010,900 to 4,012,423 _RS19425
Locus Name Description Strand Phenotype
ABID97_RS19375 ABID97_RS19375 bifunctional 2-methylcitrate dehydratase/aconitate hydratase - strong
ABID97_RS19380 ABID97_RS19380 2-methylcitrate synthase - strong
ABID97_RS19385 ABID97_RS19385 short-chain fatty acyl-CoA regulator family protein + strong
ABID97_RS19390 ABID97_RS19390 hypothetical protein - insig.
ABID97_RS19395 ABID97_RS19395 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase - sig.
ABID97_RS19400 ABID97_RS19400 LysR family transcriptional regulator + no data
ABID97_RS19405 ABID97_RS19405 3-hydroxyisobutyrate dehydrogenase - insig.
ABID97_RS19410 ABID97_RS19410 enoyl-CoA hydratase/isomerase family protein - sig.
ABID97_RS19415 ABID97_RS19415 acyl-CoA dehydrogenase family protein - insig.
ABID97_RS19420 ABID97_RS19420 lysozyme inhibitor LprI family protein - no data
ABID97_RS19425 ABID97_RS19425 CoA-acylating methylmalonate-semialdehyde dehydrogenase - sig.

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