Gene info for ABID97_RS17900 in Variovorax sp. OAS795

Annotation: GspH/FimT family pseudopilin
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 3,699,641 to 3,700,171
See nucleotide sequence around ABID97_RS17900 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS17875 and ABID97_RS17880 are separated by 190 nucleotidesABID97_RS17880 and ABID97_RS17885 are separated by 596 nucleotidesABID97_RS17885 and ABID97_RS17890 are separated by 184 nucleotidesABID97_RS17890 and ABID97_RS17895 are separated by 19 nucleotidesABID97_RS17895 and ABID97_RS17900 are separated by 33 nucleotidesABID97_RS17900 and ABID97_RS17905 overlap by 4 nucleotidesABID97_RS17905 and ABID97_RS17910 overlap by 4 nucleotidesABID97_RS17910 and ABID97_RS17915 are separated by 22 nucleotidesABID97_RS17915 and ABID97_RS17920 are separated by 27 nucleotidesABID97_RS17920 and ABID97_RS17925 overlap by 4 nucleotides ABID97_RS17875: ABID97_RS17875 - DUF349 domain-containing protein, at 3,689,391 to 3,692,264 _RS17875 ABID97_RS17880: ABID97_RS17880 - DUF748 domain-containing protein, at 3,692,455 to 3,696,270 _RS17880 ABID97_RS17885: ABID97_RS17885 - lytic transglycosylase domain-containing protein, at 3,696,867 to 3,697,715 _RS17885 ABID97_RS17890: ABID97_RS17890 - serine hydroxymethyltransferase, at 3,697,900 to 3,699,144 _RS17890 ABID97_RS17895: ABID97_RS17895 - transcriptional regulator NrdR, at 3,699,164 to 3,699,607 _RS17895 ABID97_RS17900: ABID97_RS17900 - GspH/FimT family pseudopilin, at 3,699,641 to 3,700,171 _RS17900 ABID97_RS17905: ABID97_RS17905 - type IV pilin protein, at 3,700,168 to 3,700,593 _RS17905 ABID97_RS17910: ABID97_RS17910 - PilC/PilY family type IV pilus protein, at 3,700,590 to 3,703,736 _RS17910 ABID97_RS17915: ABID97_RS17915 - hypothetical protein, at 3,703,759 to 3,704,541 _RS17915 ABID97_RS17920: ABID97_RS17920 - PilX N-terminal domain-containing pilus assembly protein, at 3,704,569 to 3,705,222 _RS17920 ABID97_RS17925: ABID97_RS17925 - PilW family protein, at 3,705,219 to 3,706,184 _RS17925
Locus Name Description Strand Phenotype
ABID97_RS17875 ABID97_RS17875 DUF349 domain-containing protein - sig.
ABID97_RS17880 ABID97_RS17880 DUF748 domain-containing protein - insig.
ABID97_RS17885 ABID97_RS17885 lytic transglycosylase domain-containing protein + sig.
ABID97_RS17890 ABID97_RS17890 serine hydroxymethyltransferase + no data
ABID97_RS17895 ABID97_RS17895 transcriptional regulator NrdR + strong
ABID97_RS17900 ABID97_RS17900 GspH/FimT family pseudopilin - no data
ABID97_RS17905 ABID97_RS17905 type IV pilin protein - insig.
ABID97_RS17910 ABID97_RS17910 PilC/PilY family type IV pilus protein - insig.
ABID97_RS17915 ABID97_RS17915 hypothetical protein - insig.
ABID97_RS17920 ABID97_RS17920 PilX N-terminal domain-containing pilus assembly protein - insig.
ABID97_RS17925 ABID97_RS17925 PilW family protein - insig.

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