Gene info for ABID97_RS13005 in Variovorax sp. OAS795

Annotation: type VI secretion system baseplate subunit TssK
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, + strand, nucleotides 2,700,564 to 2,701,952
See nucleotide sequence around ABID97_RS13005 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS12980 and ABID97_RS12985 are separated by 14 nucleotidesABID97_RS12985 and ABID97_RS12990 are separated by 21 nucleotidesABID97_RS12990 and ABID97_RS12995 are separated by 13 nucleotidesABID97_RS12995 and ABID97_RS13000 are separated by 107 nucleotidesABID97_RS13000 and ABID97_RS13005 are separated by 16 nucleotidesABID97_RS13005 and ABID97_RS13010 are separated by 3 nucleotidesABID97_RS13010 and ABID97_RS13015 overlap by 4 nucleotidesABID97_RS13015 and ABID97_RS13020 are separated by 35 nucleotidesABID97_RS13020 and ABID97_RS13025 are separated by 157 nucleotidesABID97_RS13025 and ABID97_RS13030 are separated by 85 nucleotides ABID97_RS12980: ABID97_RS12980 - DUF3540 domain-containing protein, at 2,697,270 to 2,697,983 _RS12980 ABID97_RS12985: ABID97_RS12985 - DUF4150 domain-containing protein, at 2,697,998 to 2,698,390 _RS12985 ABID97_RS12990: ABID97_RS12990 - hypothetical protein, at 2,698,412 to 2,699,215 _RS12990 ABID97_RS12995: ABID97_RS12995 - hypothetical protein, at 2,699,229 to 2,699,738 _RS12995 ABID97_RS13000: ABID97_RS13000 - type VI secretion system lipoprotein TssJ, at 2,699,846 to 2,700,547 _RS13000 ABID97_RS13005: ABID97_RS13005 - type VI secretion system baseplate subunit TssK, at 2,700,564 to 2,701,952 _RS13005 ABID97_RS13010: ABID97_RS13010 - DotU family type IV/VI secretion system protein, at 2,701,956 to 2,702,630 _RS13010 ABID97_RS13015: ABID97_RS13015 - type VI secretion protein IcmF/TssM N-terminal domain-containing protein, at 2,702,627 to 2,706,433 _RS13015 ABID97_RS13020: ABID97_RS13020 - serine hydrolase, at 2,706,469 to 2,708,160 _RS13020 ABID97_RS13025: ABID97_RS13025 - helix-turn-helix domain-containing protein, at 2,708,318 to 2,709,316 _RS13025 ABID97_RS13030: ABID97_RS13030 - AraC family transcriptional regulator, at 2,709,402 to 2,710,391 _RS13030
Locus Name Description Strand Phenotype
ABID97_RS12980 ABID97_RS12980 DUF3540 domain-containing protein + no data
ABID97_RS12985 ABID97_RS12985 DUF4150 domain-containing protein + no data
ABID97_RS12990 ABID97_RS12990 hypothetical protein + no data
ABID97_RS12995 ABID97_RS12995 hypothetical protein - insig.
ABID97_RS13000 ABID97_RS13000 type VI secretion system lipoprotein TssJ + no data
ABID97_RS13005 ABID97_RS13005 type VI secretion system baseplate subunit TssK + insig.
ABID97_RS13010 ABID97_RS13010 DotU family type IV/VI secretion system protein + insig.
ABID97_RS13015 ABID97_RS13015 type VI secretion protein IcmF/TssM N-terminal domain-containing protein + insig.
ABID97_RS13020 ABID97_RS13020 serine hydrolase + insig.
ABID97_RS13025 ABID97_RS13025 helix-turn-helix domain-containing protein + insig.
ABID97_RS13030 ABID97_RS13030 AraC family transcriptional regulator + insig.

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