Gene info for ABID97_RS08440 in Variovorax sp. OAS795

Annotation: tRNA pseudouridine(38-40) synthase TruA
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 1,771,689 to 1,772,501
See nucleotide sequence around ABID97_RS08440 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS08415 and ABID97_RS08420 are separated by 22 nucleotidesABID97_RS08420 and ABID97_RS08425 are separated by 66 nucleotidesABID97_RS08425 and ABID97_RS08430 overlap by 1 nucleotidesABID97_RS08430 and ABID97_RS08435 are separated by 62 nucleotidesABID97_RS08435 and ABID97_RS08440 overlap by 4 nucleotidesABID97_RS08440 and ABID97_RS08445 are separated by 27 nucleotidesABID97_RS08445 and ABID97_RS08450 are separated by 167 nucleotidesABID97_RS08450 and ABID97_RS08455 are separated by 92 nucleotidesABID97_RS08455 and ABID97_RS08460 are separated by 40 nucleotidesABID97_RS08460 and ABID97_RS08465 are separated by 14 nucleotides ABID97_RS08415: ABID97_RS08415 - YggT family protein, at 1,767,299 to 1,767,856 _RS08415 ABID97_RS08420: ABID97_RS08420 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 1,767,879 to 1,768,751 _RS08420 ABID97_RS08425: ABID97_RS08425 - tryptophan synthase subunit alpha, at 1,768,818 to 1,769,663 _RS08425 ABID97_RS08430: ABID97_RS08430 - tryptophan synthase subunit beta, at 1,769,663 to 1,770,937 _RS08430 ABID97_RS08435: ABID97_RS08435 - phosphoribosylanthranilate isomerase, at 1,771,000 to 1,771,692 _RS08435 ABID97_RS08440: ABID97_RS08440 - tRNA pseudouridine(38-40) synthase TruA, at 1,771,689 to 1,772,501 _RS08440 ABID97_RS08445: ABID97_RS08445 - FimV/HubP family polar landmark protein, at 1,772,529 to 1,775,330 _RS08445 ABID97_RS08450: ABID97_RS08450 - aspartate-semialdehyde dehydrogenase, at 1,775,498 to 1,776,640 _RS08450 ABID97_RS08455: ABID97_RS08455 - 3-isopropylmalate dehydrogenase, at 1,776,733 to 1,777,821 _RS08455 ABID97_RS08460: ABID97_RS08460 - 3-isopropylmalate dehydratase small subunit, at 1,777,862 to 1,778,512 _RS08460 ABID97_RS08465: ABID97_RS08465 - 3-isopropylmalate dehydratase large subunit, at 1,778,527 to 1,779,948 _RS08465
Locus Name Description Strand Phenotype
ABID97_RS08415 ABID97_RS08415 YggT family protein + insig.
ABID97_RS08420 ABID97_RS08420 acetyl-CoA carboxylase, carboxyltransferase subunit beta - no data
ABID97_RS08425 ABID97_RS08425 tryptophan synthase subunit alpha - strong
ABID97_RS08430 ABID97_RS08430 tryptophan synthase subunit beta - strong
ABID97_RS08435 ABID97_RS08435 phosphoribosylanthranilate isomerase - cofit
ABID97_RS08440 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA - strong
ABID97_RS08445 ABID97_RS08445 FimV/HubP family polar landmark protein - strong
ABID97_RS08450 ABID97_RS08450 aspartate-semialdehyde dehydrogenase - no data
ABID97_RS08455 ABID97_RS08455 3-isopropylmalate dehydrogenase - no data
ABID97_RS08460 ABID97_RS08460 3-isopropylmalate dehydratase small subunit - no data
ABID97_RS08465 ABID97_RS08465 3-isopropylmalate dehydratase large subunit - no data

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