Gene info for ABID97_RS05840 in Variovorax sp. OAS795

Annotation: LysR substrate-binding domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 1,234,082 to 1,234,966
See nucleotide sequence around ABID97_RS05840 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS05815 and ABID97_RS05820 are separated by 43 nucleotidesABID97_RS05820 and ABID97_RS05825 are separated by 129 nucleotidesABID97_RS05825 and ABID97_RS05830 overlap by 4 nucleotidesABID97_RS05830 and ABID97_RS05835 are separated by 27 nucleotidesABID97_RS05835 and ABID97_RS05840 are separated by 73 nucleotidesABID97_RS05840 and ABID97_RS05845 are separated by 129 nucleotidesABID97_RS05845 and ABID97_RS05850 are separated by 126 nucleotidesABID97_RS05850 and ABID97_RS05855 are separated by 66 nucleotidesABID97_RS05855 and ABID97_RS05860 are separated by 38 nucleotidesABID97_RS05860 and ABID97_RS05865 are separated by 36 nucleotides ABID97_RS05815: ABID97_RS05815 - sialic acid TRAP transporter substrate-binding protein SiaP, at 1,229,779 to 1,230,774 _RS05815 ABID97_RS05820: ABID97_RS05820 - FadR/GntR family transcriptional regulator, at 1,230,818 to 1,231,525 _RS05820 ABID97_RS05825: ABID97_RS05825 - SDR family oxidoreductase, at 1,231,655 to 1,232,389 _RS05825 ABID97_RS05830: ABID97_RS05830 - SDR family NAD(P)-dependent oxidoreductase, at 1,232,386 to 1,233,132 _RS05830 ABID97_RS05835: ABID97_RS05835 - fumarylacetoacetate hydrolase family protein, at 1,233,160 to 1,234,008 _RS05835 ABID97_RS05840: ABID97_RS05840 - LysR substrate-binding domain-containing protein, at 1,234,082 to 1,234,966 _RS05840 ABID97_RS05845: ABID97_RS05845 - SDR family oxidoreductase, at 1,235,096 to 1,235,854 _RS05845 ABID97_RS05850: ABID97_RS05850 - TetR/AcrR family transcriptional regulator, at 1,235,981 to 1,236,679 _RS05850 ABID97_RS05855: ABID97_RS05855 - acyl-CoA dehydrogenase C-terminal domain-containing protein, at 1,236,746 to 1,238,542 _RS05855 ABID97_RS05860: ABID97_RS05860 - DUF2147 domain-containing protein, at 1,238,581 to 1,239,015 _RS05860 ABID97_RS05865: ABID97_RS05865 - 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein, at 1,239,052 to 1,241,451 _RS05865
Locus Name Description Strand Phenotype
ABID97_RS05815 ABID97_RS05815 sialic acid TRAP transporter substrate-binding protein SiaP - strong
ABID97_RS05820 ABID97_RS05820 FadR/GntR family transcriptional regulator - strong
ABID97_RS05825 ABID97_RS05825 SDR family oxidoreductase + strong
ABID97_RS05830 ABID97_RS05830 SDR family NAD(P)-dependent oxidoreductase + strong
ABID97_RS05835 ABID97_RS05835 fumarylacetoacetate hydrolase family protein + strong
ABID97_RS05840 ABID97_RS05840 LysR substrate-binding domain-containing protein - sig.
ABID97_RS05845 ABID97_RS05845 SDR family oxidoreductase + sig.
ABID97_RS05850 ABID97_RS05850 TetR/AcrR family transcriptional regulator + strong
ABID97_RS05855 ABID97_RS05855 acyl-CoA dehydrogenase C-terminal domain-containing protein + strong
ABID97_RS05860 ABID97_RS05860 DUF2147 domain-containing protein + no data
ABID97_RS05865 ABID97_RS05865 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein + sig.

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