Gene info for ABID97_RS05810 in Variovorax sp. OAS795

Annotation: TRAP transporter small permease
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 1,229,182 to 1,229,739
See nucleotide sequence around ABID97_RS05810 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS05785 and ABID97_RS05790 overlap by 8 nucleotidesABID97_RS05790 and ABID97_RS05795 are separated by 18 nucleotidesABID97_RS05795 and ABID97_RS05800 are separated by 7 nucleotidesABID97_RS05800 and ABID97_RS05805 are separated by 23 nucleotidesABID97_RS05805 and ABID97_RS05810 are separated by 19 nucleotidesABID97_RS05810 and ABID97_RS05815 are separated by 39 nucleotidesABID97_RS05815 and ABID97_RS05820 are separated by 43 nucleotidesABID97_RS05820 and ABID97_RS05825 are separated by 129 nucleotidesABID97_RS05825 and ABID97_RS05830 overlap by 4 nucleotidesABID97_RS05830 and ABID97_RS05835 are separated by 27 nucleotides ABID97_RS05785: ABID97_RS05785 - DUF2182 domain-containing protein, at 1,223,447 to 1,224,253 _RS05785 ABID97_RS05790: ABID97_RS05790 - DMT family transporter, at 1,224,246 to 1,225,133 _RS05790 ABID97_RS05795: ABID97_RS05795 - malate/lactate/ureidoglycolate dehydrogenase, at 1,225,152 to 1,226,210 _RS05795 ABID97_RS05800: ABID97_RS05800 - altronate dehydratase family protein, at 1,226,218 to 1,227,744 _RS05800 ABID97_RS05805: ABID97_RS05805 - TRAP transporter large permease, at 1,227,768 to 1,229,162 _RS05805 ABID97_RS05810: ABID97_RS05810 - TRAP transporter small permease, at 1,229,182 to 1,229,739 _RS05810 ABID97_RS05815: ABID97_RS05815 - sialic acid TRAP transporter substrate-binding protein SiaP, at 1,229,779 to 1,230,774 _RS05815 ABID97_RS05820: ABID97_RS05820 - FadR/GntR family transcriptional regulator, at 1,230,818 to 1,231,525 _RS05820 ABID97_RS05825: ABID97_RS05825 - SDR family oxidoreductase, at 1,231,655 to 1,232,389 _RS05825 ABID97_RS05830: ABID97_RS05830 - SDR family NAD(P)-dependent oxidoreductase, at 1,232,386 to 1,233,132 _RS05830 ABID97_RS05835: ABID97_RS05835 - fumarylacetoacetate hydrolase family protein, at 1,233,160 to 1,234,008 _RS05835
Locus Name Description Strand Phenotype
ABID97_RS05785 ABID97_RS05785 DUF2182 domain-containing protein + insig.
ABID97_RS05790 ABID97_RS05790 DMT family transporter + sig.
ABID97_RS05795 ABID97_RS05795 malate/lactate/ureidoglycolate dehydrogenase - strong
ABID97_RS05800 ABID97_RS05800 altronate dehydratase family protein - strong
ABID97_RS05805 ABID97_RS05805 TRAP transporter large permease - strong
ABID97_RS05810 ABID97_RS05810 TRAP transporter small permease - cofit
ABID97_RS05815 ABID97_RS05815 sialic acid TRAP transporter substrate-binding protein SiaP - strong
ABID97_RS05820 ABID97_RS05820 FadR/GntR family transcriptional regulator - strong
ABID97_RS05825 ABID97_RS05825 SDR family oxidoreductase + strong
ABID97_RS05830 ABID97_RS05830 SDR family NAD(P)-dependent oxidoreductase + strong
ABID97_RS05835 ABID97_RS05835 fumarylacetoacetate hydrolase family protein + strong

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