Gene info for ABID97_RS04580 in Variovorax sp. OAS795

Annotation: tripartite tricarboxylate transporter substrate binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 952,322 to 953,299
See nucleotide sequence around ABID97_RS04580 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS04555 and ABID97_RS04560 are separated by 146 nucleotidesABID97_RS04560 and ABID97_RS04565 are separated by 30 nucleotidesABID97_RS04565 and ABID97_RS04570 overlap by 4 nucleotidesABID97_RS04570 and ABID97_RS04575 are separated by 3 nucleotidesABID97_RS04575 and ABID97_RS04580 overlap by 8 nucleotidesABID97_RS04580 and ABID97_RS04585 are separated by 123 nucleotidesABID97_RS04585 and ABID97_RS04590 are separated by 14 nucleotidesABID97_RS04590 and ABID97_RS04595 are separated by 20 nucleotidesABID97_RS04595 and ABID97_RS04600 are separated by 79 nucleotidesABID97_RS04600 and ABID97_RS04605 are separated by 120 nucleotides ABID97_RS04555: ABID97_RS04555 - alpha-amylase family glycosyl hydrolase, at 946,793 to 948,482 _RS04555 ABID97_RS04560: ABID97_RS04560 - NAD(P)/FAD-dependent oxidoreductase, at 948,629 to 950,107 _RS04560 ABID97_RS04565: ABID97_RS04565 - CMD domain protein, at 950,138 to 950,659 _RS04565 ABID97_RS04570: ABID97_RS04570 - peroxidase-related enzyme, at 950,656 to 951,246 _RS04570 ABID97_RS04575: ABID97_RS04575 - NAD/NADP octopine/nopaline dehydrogenase family protein, at 951,250 to 952,329 _RS04575 ABID97_RS04580: ABID97_RS04580 - tripartite tricarboxylate transporter substrate binding protein, at 952,322 to 953,299 _RS04580 ABID97_RS04585: ABID97_RS04585 - leucine--tRNA ligase, at 953,423 to 956,053 _RS04585 ABID97_RS04590: ABID97_RS04590 - LPS assembly lipoprotein LptE, at 956,068 to 956,589 _RS04590 ABID97_RS04595: ABID97_RS04595 - DNA polymerase III subunit delta, at 956,610 to 957,683 _RS04595 ABID97_RS04600: ABID97_RS04600 - glutamate-5-semialdehyde dehydrogenase, at 957,763 to 959,055 _RS04600 ABID97_RS04605: ABID97_RS04605 - glutamate--cysteine ligase, at 959,176 to 960,483 _RS04605
Locus Name Description Strand Phenotype
ABID97_RS04555 ABID97_RS04555 alpha-amylase family glycosyl hydrolase - sig.
ABID97_RS04560 ABID97_RS04560 NAD(P)/FAD-dependent oxidoreductase + sig.
ABID97_RS04565 ABID97_RS04565 CMD domain protein + insig.
ABID97_RS04570 ABID97_RS04570 peroxidase-related enzyme + insig.
ABID97_RS04575 ABID97_RS04575 NAD/NADP octopine/nopaline dehydrogenase family protein - insig.
ABID97_RS04580 ABID97_RS04580 tripartite tricarboxylate transporter substrate binding protein - insig.
ABID97_RS04585 ABID97_RS04585 leucine--tRNA ligase + no data
ABID97_RS04590 ABID97_RS04590 LPS assembly lipoprotein LptE + no data
ABID97_RS04595 ABID97_RS04595 DNA polymerase III subunit delta + no data
ABID97_RS04600 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase + no data
ABID97_RS04605 ABID97_RS04605 glutamate--cysteine ligase + strong

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