Gene info for ABID97_RS00540 in Variovorax sp. OAS795

Annotation: HAMP domain-containing sensor histidine kinase
Type 1: Protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 116,446 to 117,840
See nucleotide sequence around ABID97_RS00540 or for all of scaffold NZ_JBEPOH010000001

Other databases: NCBI

Nearby Genes

500 ntABID97_RS00515 and ABID97_RS00520 overlap by 4 nucleotidesABID97_RS00520 and ABID97_RS00525 are separated by 10 nucleotidesABID97_RS00525 and ABID97_RS00530 are separated by 77 nucleotidesABID97_RS00530 and ABID97_RS00535 are separated by 7 nucleotidesABID97_RS00535 and ABID97_RS00540 are separated by 106 nucleotidesABID97_RS00540 and ABID97_RS00545 overlap by 4 nucleotidesABID97_RS00545 and ABID97_RS00550 are separated by 109 nucleotidesABID97_RS00550 and ABID97_RS00555 are separated by 112 nucleotidesABID97_RS00555 and ABID97_RS00560 are separated by 43 nucleotidesABID97_RS00560 and ABID97_RS00565 are separated by 140 nucleotides ABID97_RS00515: ABID97_RS00515 - SLC13 family permease, at 112,152 to 113,282 _RS00515 ABID97_RS00520: ABID97_RS00520 - AraC family transcriptional regulator, at 113,279 to 114,031 _RS00520 ABID97_RS00525: ABID97_RS00525 - DMT family transporter, at 114,042 to 114,887 _RS00525 ABID97_RS00530: ABID97_RS00530 - hypothetical protein, at 114,965 to 115,288 _RS00530 ABID97_RS00535: ABID97_RS00535 - NADP-dependent oxidoreductase, at 115,296 to 116,339 _RS00535 ABID97_RS00540: ABID97_RS00540 - HAMP domain-containing sensor histidine kinase, at 116,446 to 117,840 _RS00540 ABID97_RS00545: ABID97_RS00545 - response regulator transcription factor, at 117,837 to 118,538 _RS00545 ABID97_RS00550: ABID97_RS00550 - DUF4260 domain-containing protein, at 118,648 to 119,028 _RS00550 ABID97_RS00555: ABID97_RS00555 - Spy/CpxP family protein refolding chaperone, at 119,141 to 119,608 _RS00555 ABID97_RS00560: ABID97_RS00560 - DUF4148 domain-containing protein, at 119,652 to 120,023 _RS00560 ABID97_RS00565: ABID97_RS00565 - phosphoenolpyruvate--protein phosphotransferase, at 120,164 to 121,957 _RS00565
Locus Name Description Strand Phenotype
ABID97_RS00515 ABID97_RS00515 SLC13 family permease + insig.
ABID97_RS00520 ABID97_RS00520 AraC family transcriptional regulator + insig.
ABID97_RS00525 ABID97_RS00525 DMT family transporter + strong
ABID97_RS00530 ABID97_RS00530 hypothetical protein + cofit
ABID97_RS00535 ABID97_RS00535 NADP-dependent oxidoreductase - insig.
ABID97_RS00540 ABID97_RS00540 HAMP domain-containing sensor histidine kinase - strong
ABID97_RS00545 ABID97_RS00545 response regulator transcription factor - insig.
ABID97_RS00550 ABID97_RS00550 DUF4260 domain-containing protein - insig.
ABID97_RS00555 ABID97_RS00555 Spy/CpxP family protein refolding chaperone - no data
ABID97_RS00560 ABID97_RS00560 DUF4148 domain-containing protein - insig.
ABID97_RS00565 ABID97_RS00565 phosphoenolpyruvate--protein phosphotransferase - strong

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