Gene info for ABI39_RS21180 in Phocaeicola dorei CL03T12C01

Annotation: sigma-70 family RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_CP011531, - strand, nucleotides 5,214,719 to 5,215,354
See nucleotide sequence around ABI39_RS21180 or for all of scaffold NZ_CP011531

Other databases: NCBI

Nearby Genes

500 ntABI39_RS21155 and ABI39_RS21160 are separated by 112 nucleotidesABI39_RS21160 and ABI39_RS21165 are separated by 12 nucleotidesABI39_RS21165 and ABI39_RS21170 are separated by 15 nucleotidesABI39_RS21170 and ABI39_RS21175 are separated by 148 nucleotidesABI39_RS21175 and ABI39_RS21180 are separated by 207 nucleotidesABI39_RS21180 and ABI39_RS21185 are separated by 114 nucleotidesABI39_RS21185 and ABI39_RS21190 are separated by 305 nucleotidesABI39_RS21190 and ABI39_RS21195 are separated by 12 nucleotidesABI39_RS21195 and ABI39_RS21200 are separated by 18 nucleotidesABI39_RS21200 and ABI39_RS21205 are separated by 46 nucleotides ABI39_RS21155: ABI39_RS21155 - HAD family hydrolase, at 5,205,834 to 5,206,568 _RS21155 ABI39_RS21160: ABI39_RS21160 - alpha/beta hydrolase family protein, at 5,206,681 to 5,207,925 _RS21160 ABI39_RS21165: ABI39_RS21165 - RagB/SusD family nutrient uptake outer membrane protein, at 5,207,938 to 5,209,527 _RS21165 ABI39_RS21170: ABI39_RS21170 - TonB-dependent receptor, at 5,209,543 to 5,213,280 _RS21170 ABI39_RS21175: ABI39_RS21175 - FecR domain-containing protein, at 5,213,429 to 5,214,511 _RS21175 ABI39_RS21180: ABI39_RS21180 - sigma-70 family RNA polymerase sigma factor, at 5,214,719 to 5,215,354 _RS21180 ABI39_RS21185: ABI39_RS21185 - ROK family transcriptional regulator, at 5,215,469 to 5,216,674 _RS21185 ABI39_RS21190: ABI39_RS21190 - dihydrodipicolinate synthase family protein, at 5,216,980 to 5,217,894 _RS21190 ABI39_RS21195: ABI39_RS21195 - AGE family epimerase/isomerase, at 5,217,907 to 5,219,103 _RS21195 ABI39_RS21200: ABI39_RS21200 - MFS transporter, at 5,219,122 to 5,220,357 _RS21200 ABI39_RS21205: ABI39_RS21205 - glucosamine-6-phosphate deaminase, at 5,220,404 to 5,221,195 _RS21205
Locus Name Description Strand Phenotype
ABI39_RS21155 ABI39_RS21155 HAD family hydrolase + sig.
ABI39_RS21160 ABI39_RS21160 alpha/beta hydrolase family protein - insig.
ABI39_RS21165 ABI39_RS21165 RagB/SusD family nutrient uptake outer membrane protein - insig.
ABI39_RS21170 ABI39_RS21170 TonB-dependent receptor - insig.
ABI39_RS21175 ABI39_RS21175 FecR domain-containing protein - insig.
ABI39_RS21180 ABI39_RS21180 sigma-70 family RNA polymerase sigma factor - insig.
ABI39_RS21185 ABI39_RS21185 ROK family transcriptional regulator - strong
ABI39_RS21190 ABI39_RS21190 dihydrodipicolinate synthase family protein + sig.
ABI39_RS21195 ABI39_RS21195 AGE family epimerase/isomerase + strong
ABI39_RS21200 ABI39_RS21200 MFS transporter + strong
ABI39_RS21205 ABI39_RS21205 glucosamine-6-phosphate deaminase + no data

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