Gene info for ABI39_RS18080 in Phocaeicola dorei CL03T12C01

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP011531, - strand, nucleotides 4,561,628 to 4,563,616
See nucleotide sequence around ABI39_RS18080 or for all of scaffold NZ_CP011531

Other databases: NCBI

Nearby Genes

500 ntABI39_RS22840 and ABI39_RS18065 are separated by 45 nucleotidesABI39_RS18065 and ABI39_RS18070 are separated by 336 nucleotidesABI39_RS18070 and ABI39_RS23125 are separated by 935 nucleotidesABI39_RS23125 and ABI39_RS18075 are separated by 9 nucleotidesABI39_RS18075 and ABI39_RS18080 are separated by 135 nucleotidesABI39_RS18080 and ABI39_RS18085 are separated by 13 nucleotidesABI39_RS18085 and ABI39_RS18090 are separated by 475 nucleotidesABI39_RS18090 and ABI39_RS18105 are separated by 932 nucleotidesABI39_RS18105 and ABI39_RS22410 overlap by 7 nucleotidesABI39_RS22410 and ABI39_RS18115 are separated by 170 nucleotides ABI39_RS22840: ABI39_RS22840 - right-handed parallel beta-helix repeat-containing protein, at 4,556,034 to 4,556,282 _RS22840 ABI39_RS18065: ABI39_RS18065 - alpha-L-fucosidase, at 4,556,328 to 4,557,269 _RS18065 ABI39_RS18070: ABI39_RS18070 - DUF3874 domain-containing protein, at 4,557,606 to 4,557,887 _RS18070 ABI39_RS23125: ABI39_RS23125 - hypothetical protein, at 4,558,823 to 4,558,960 _RS23125 ABI39_RS18075: ABI39_RS18075 - hypothetical protein, at 4,558,970 to 4,561,492 _RS18075 ABI39_RS18080: ABI39_RS18080 - RagB/SusD family nutrient uptake outer membrane protein, at 4,561,628 to 4,563,616 _RS18080 ABI39_RS18085: ABI39_RS18085 - TonB-dependent receptor, at 4,563,630 to 4,566,839 _RS18085 ABI39_RS18090: ABI39_RS18090 - DUF4974 domain-containing protein, at 4,567,315 to 4,568,325 _RS18090 ABI39_RS18105: ABI39_RS18105 - hypothetical protein, at 4,569,258 to 4,569,692 _RS18105 ABI39_RS22410: ABI39_RS22410 - alpha-L-fucosidase, at 4,569,686 to 4,570,160 _RS22410 ABI39_RS18115: ABI39_RS18115 - RNA polymerase sigma-70 factor, at 4,570,331 to 4,570,912 _RS18115
Locus Name Description Strand Phenotype
ABI39_RS22840 ABI39_RS22840 right-handed parallel beta-helix repeat-containing protein - insig.
ABI39_RS18065 ABI39_RS18065 alpha-L-fucosidase - insig.
ABI39_RS18070 ABI39_RS18070 DUF3874 domain-containing protein - insig.
ABI39_RS23125 ABI39_RS23125 hypothetical protein - insig.
ABI39_RS18075 ABI39_RS18075 hypothetical protein - insig.
ABI39_RS18080 ABI39_RS18080 RagB/SusD family nutrient uptake outer membrane protein - insig.
ABI39_RS18085 ABI39_RS18085 TonB-dependent receptor - insig.
ABI39_RS18090 ABI39_RS18090 DUF4974 domain-containing protein - insig.
ABI39_RS18105 ABI39_RS18105 hypothetical protein - insig.
ABI39_RS22410 ABI39_RS22410 alpha-L-fucosidase + insig.
ABI39_RS18115 ABI39_RS18115 RNA polymerase sigma-70 factor + insig.

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