Gene info for ABI39_RS15540 in Phocaeicola dorei CL03T12C01

Annotation: helix-turn-helix transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_CP011531, + strand, nucleotides 4,016,321 to 4,017,229
See nucleotide sequence around ABI39_RS15540 or for all of scaffold NZ_CP011531

Other databases: NCBI

Nearby Genes

500 ntABI39_RS15515 and ABI39_RS15520 are separated by 21 nucleotidesABI39_RS15520 and ABI39_RS15525 are separated by 4 nucleotidesABI39_RS15525 and ABI39_RS15530 are separated by 678 nucleotidesABI39_RS15530 and ABI39_RS15535 are separated by 5 nucleotidesABI39_RS15535 and ABI39_RS15540 are separated by 324 nucleotidesABI39_RS15540 and ABI39_RS15545 are separated by 31 nucleotidesABI39_RS15545 and ABI39_RS15550 are separated by 186 nucleotidesABI39_RS15550 and ABI39_RS15555 are separated by 108 nucleotidesABI39_RS15555 and ABI39_RS15560 are separated by 13 nucleotidesABI39_RS15560 and ABI39_RS22245 are separated by 440 nucleotides ABI39_RS15515: ABI39_RS15515 - precorrin-4 C(11)-methyltransferase, at 4,009,790 to 4,011,601 _RS15515 ABI39_RS15520: ABI39_RS15520 - bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase, at 4,011,623 to 4,012,804 _RS15520 ABI39_RS15525: ABI39_RS15525 - precorrin-3B C(17)-methyltransferase, at 4,012,809 to 4,014,215 _RS15525 ABI39_RS15530: ABI39_RS15530 - flavin reductase family protein, at 4,014,894 to 4,015,454 _RS15530 ABI39_RS15535: ABI39_RS15535 - NAD(P)H-dependent oxidoreductase, at 4,015,460 to 4,015,996 _RS15535 ABI39_RS15540: ABI39_RS15540 - helix-turn-helix transcriptional regulator, at 4,016,321 to 4,017,229 _RS15540 ABI39_RS15545: ABI39_RS15545 - AraC family transcriptional regulator, at 4,017,261 to 4,018,148 _RS15545 ABI39_RS15550: ABI39_RS15550 - 1-deoxy-D-xylulose-5-phosphate synthase, at 4,018,335 to 4,020,095 _RS15550 ABI39_RS15555: ABI39_RS15555 - ABC transporter substrate-binding protein, at 4,020,204 to 4,021,361 _RS15555 ABI39_RS15560: ABI39_RS15560 - TonB-dependent receptor, at 4,021,375 to 4,023,552 _RS15560 ABI39_RS22245: ABI39_RS22245 - hypothetical protein, at 4,023,993 to 4,024,373 _RS22245
Locus Name Description Strand Phenotype
ABI39_RS15515 ABI39_RS15515 precorrin-4 C(11)-methyltransferase - strong
ABI39_RS15520 ABI39_RS15520 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase - strong
ABI39_RS15525 ABI39_RS15525 precorrin-3B C(17)-methyltransferase - strong
ABI39_RS15530 ABI39_RS15530 flavin reductase family protein - insig.
ABI39_RS15535 ABI39_RS15535 NAD(P)H-dependent oxidoreductase - insig.
ABI39_RS15540 ABI39_RS15540 helix-turn-helix transcriptional regulator + insig.
ABI39_RS15545 ABI39_RS15545 AraC family transcriptional regulator + insig.
ABI39_RS15550 ABI39_RS15550 1-deoxy-D-xylulose-5-phosphate synthase + insig.
ABI39_RS15555 ABI39_RS15555 ABC transporter substrate-binding protein - insig.
ABI39_RS15560 ABI39_RS15560 TonB-dependent receptor - insig.
ABI39_RS22245 ABI39_RS22245 hypothetical protein + insig.

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