Gene info for ABI39_RS12260 in Phocaeicola dorei CL03T12C01

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP011531, - strand, nucleotides 3,234,641 to 3,236,155
See nucleotide sequence around ABI39_RS12260 or for all of scaffold NZ_CP011531

Other databases: NCBI

Nearby Genes

500 ntABI39_RS12235 and ABI39_RS12240 are separated by 92 nucleotidesABI39_RS12240 and ABI39_RS12245 are separated by 179 nucleotidesABI39_RS12245 and ABI39_RS12250 are separated by 149 nucleotidesABI39_RS12250 and ABI39_RS12255 are separated by 43 nucleotidesABI39_RS12255 and ABI39_RS12260 are separated by 111 nucleotidesABI39_RS12260 and ABI39_RS12265 are separated by 18 nucleotidesABI39_RS12265 and ABI39_RS12270 are separated by 15 nucleotidesABI39_RS12270 and ABI39_RS12275 are separated by 102 nucleotidesABI39_RS12275 and ABI39_RS12280 are separated by 270 nucleotidesABI39_RS12280 and ABI39_RS12285 are separated by 37 nucleotides ABI39_RS12235: ABI39_RS12235 - DUF4738 domain-containing protein, at 3,228,997 to 3,229,566 _RS12235 ABI39_RS12240: ABI39_RS12240 - PepSY-like domain-containing protein, at 3,229,659 to 3,230,099 _RS12240 ABI39_RS12245: ABI39_RS12245 - L-serine ammonia-lyase, at 3,230,279 to 3,231,487 _RS12245 ABI39_RS12250: ABI39_RS12250 - metallophosphoesterase, at 3,231,637 to 3,232,800 _RS12250 ABI39_RS12255: ABI39_RS12255 - hypothetical protein, at 3,232,844 to 3,234,529 _RS12255 ABI39_RS12260: ABI39_RS12260 - RagB/SusD family nutrient uptake outer membrane protein, at 3,234,641 to 3,236,155 _RS12260 ABI39_RS12265: ABI39_RS12265 - TonB-dependent receptor, at 3,236,174 to 3,239,563 _RS12265 ABI39_RS12270: ABI39_RS12270 - DUF4974 domain-containing protein, at 3,239,579 to 3,240,748 _RS12270 ABI39_RS12275: ABI39_RS12275 - RNA polymerase sigma-70 factor, at 3,240,851 to 3,241,402 _RS12275 ABI39_RS12280: ABI39_RS12280 - hypothetical protein, at 3,241,673 to 3,242,188 _RS12280 ABI39_RS12285: ABI39_RS12285 - GNAT family N-acetyltransferase, at 3,242,226 to 3,242,810 _RS12285
Locus Name Description Strand Phenotype
ABI39_RS12235 ABI39_RS12235 DUF4738 domain-containing protein + strong
ABI39_RS12240 ABI39_RS12240 PepSY-like domain-containing protein + insig.
ABI39_RS12245 ABI39_RS12245 L-serine ammonia-lyase - strong
ABI39_RS12250 ABI39_RS12250 metallophosphoesterase - insig.
ABI39_RS12255 ABI39_RS12255 hypothetical protein - insig.
ABI39_RS12260 ABI39_RS12260 RagB/SusD family nutrient uptake outer membrane protein - insig.
ABI39_RS12265 ABI39_RS12265 TonB-dependent receptor - insig.
ABI39_RS12270 ABI39_RS12270 DUF4974 domain-containing protein - insig.
ABI39_RS12275 ABI39_RS12275 RNA polymerase sigma-70 factor - insig.
ABI39_RS12280 ABI39_RS12280 hypothetical protein - insig.
ABI39_RS12285 ABI39_RS12285 GNAT family N-acetyltransferase - insig.

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