Gene info for ABI39_RS04680 in Phocaeicola dorei CL03T12C01

Annotation: RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_CP011531, - strand, nucleotides 1,312,488 to 1,312,997
See nucleotide sequence around ABI39_RS04680 or for all of scaffold NZ_CP011531

Other databases: NCBI

Nearby Genes

500 ntABI39_RS04655 and ABI39_RS04660 are separated by 104 nucleotidesABI39_RS04660 and ABI39_RS04665 are separated by 20 nucleotidesABI39_RS04665 and ABI39_RS04670 are separated by 106 nucleotidesABI39_RS04670 and ABI39_RS04675 are separated by 197 nucleotidesABI39_RS04675 and ABI39_RS04680 overlap by 11 nucleotidesABI39_RS04680 and ABI39_RS04685 are separated by 62 nucleotidesABI39_RS04685 and ABI39_RS04690 are separated by 4 nucleotidesABI39_RS04690 and ABI39_RS04695 are separated by 40 nucleotidesABI39_RS04695 and ABI39_RS04700 overlap by 4 nucleotidesABI39_RS04700 and ABI39_RS04705 are separated by 121 nucleotides ABI39_RS04655: ABI39_RS04655 - membrane protein, at 1,308,199 to 1,308,849 _RS04655 ABI39_RS04660: ABI39_RS04660 - acetylxylan esterase, at 1,308,954 to 1,310,264 _RS04660 ABI39_RS04665: ABI39_RS04665 - M48 family metallopeptidase, at 1,310,285 to 1,310,989 _RS04665 ABI39_RS04670: ABI39_RS04670 - DUF2807 domain-containing protein, at 1,311,096 to 1,311,827 _RS04670 ABI39_RS04675: ABI39_RS04675 - hypothetical protein, at 1,312,025 to 1,312,498 _RS04675 ABI39_RS04680: ABI39_RS04680 - RNA polymerase sigma factor, at 1,312,488 to 1,312,997 _RS04680 ABI39_RS04685: ABI39_RS04685 - acetylglutamate kinase, at 1,313,060 to 1,313,833 _RS04685 ABI39_RS04690: ABI39_RS04690 - biosynthetic arginine decarboxylase, at 1,313,838 to 1,315,730 _RS04690 ABI39_RS04695: ABI39_RS04695 - shikimate kinase, at 1,315,771 to 1,316,298 _RS04695 ABI39_RS04700: ABI39_RS04700 - type I DNA topoisomerase, at 1,316,295 to 1,318,733 _RS04700 ABI39_RS04705: ABI39_RS04705 - TonB-dependent receptor, at 1,318,855 to 1,320,552 _RS04705
Locus Name Description Strand Phenotype
ABI39_RS04655 ABI39_RS04655 membrane protein - sig.
ABI39_RS04660 ABI39_RS04660 acetylxylan esterase - insig.
ABI39_RS04665 ABI39_RS04665 M48 family metallopeptidase - insig.
ABI39_RS04670 ABI39_RS04670 DUF2807 domain-containing protein + insig.
ABI39_RS04675 ABI39_RS04675 hypothetical protein - insig.
ABI39_RS04680 ABI39_RS04680 RNA polymerase sigma factor - insig.
ABI39_RS04685 ABI39_RS04685 acetylglutamate kinase - strong
ABI39_RS04690 ABI39_RS04690 biosynthetic arginine decarboxylase - strong
ABI39_RS04695 ABI39_RS04695 shikimate kinase - strong
ABI39_RS04700 ABI39_RS04700 type I DNA topoisomerase - strong
ABI39_RS04705 ABI39_RS04705 TonB-dependent receptor - cofit

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