Gene info for b4687 in Escherichia coli BW25113

Name: shoB
Annotation: toxic membrane protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 2,698,139 to 2,698,219
See nucleotide sequence around b4687 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646314530, uniprot: C1P611

Nearby Genes

500 ntmltF and tadA overlap by 4 nucleotidestadA and yfhB are separated by 57 nucleotidesyfhB and yfhH are separated by 208 nucleotidesyfhH and yfhL are separated by 55 nucleotidesyfhL and shoB are separated by 193 nucleotidesshoB and ryfC are separated by 322 nucleotidesryfC and acpS are separated by 21 nucleotidesacpS and pdxJ overlap by 1 nucleotidespdxJ and recO are separated by 11 nucleotidesrecO and era are separated by 11 nucleotides b2558: mltF - predicted periplasmic binding protein/transglycosylase (RefSeq), at 2,693,823 to 2,695,379 mltF b2559: tadA - tRNA-specific adenosine deaminase (RefSeq), at 2,695,376 to 2,695,879 tadA b2560: yfhB - orf, hypothetical protein (VIMSS), at 2,695,937 to 2,696,572 yfhB b2561: yfhH - orf, hypothetical protein (VIMSS), at 2,696,781 to 2,697,629 yfhH b2562: yfhL - predicted 4Fe-4S cluster-containing protein (NCBI), at 2,697,685 to 2,697,945 yfhL b4687: shoB - toxic membrane protein (RefSeq), at 2,698,139 to 2,698,219 shoB b4608: ryfC - Novel sRNA, function unknown (RefSeq), at 2,698,542 to 2,698,618 ryfC b2563: acpS - 4'-phosphopantetheinyl transferase (NCBI), at 2,698,640 to 2,699,020 acpS b2564: pdxJ - pyridoxal phosphate biosynthetic protein (NCBI), at 2,699,020 to 2,699,751 pdxJ b2565: recO - DNA repair protein RecO (NCBI), at 2,699,763 to 2,700,491 recO b2566: era - GTP-binding protein Era (NCBI), at 2,700,503 to 2,701,408 era
Locus Name Description Strand Phenotype
b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) + strong
b2559 tadA tRNA-specific adenosine deaminase (RefSeq) - no data
b2560 yfhB orf, hypothetical protein (VIMSS) - insig.
b2561 yfhH orf, hypothetical protein (VIMSS) + insig.
b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) + sig.
b4687 shoB toxic membrane protein (RefSeq) - insig.
b4608 ryfC Novel sRNA, function unknown (RefSeq) + sig.
b2563 acpS 4'-phosphopantetheinyl transferase (NCBI) - no data
b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) - strong
b2565 recO DNA repair protein RecO (NCBI) - strong
b2566 era GTP-binding protein Era (NCBI) - no data

Or browse nearby genes

Or see the comparative fitness browser