Gene info for b4625 in Escherichia coli BW25113

Name: ryjC
Annotation: Novel sRNA, function unknown (RefSeq)
Type 6: Other non-coding RNA
Located on scaffold 7023, + strand, nucleotides 4,577,858 to 4,577,934
See nucleotide sequence around b4625 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntyjiT and yjiV are separated by 2 nucleotidesyjiV and mcrC are separated by 56 nucleotidesmcrC and mcrB overlap by 1 nucleotidesmcrB and yjiW are separated by 161 nucleotidesyjiW and ryjC overlap by 6 nucleotidesryjC and hsdS are separated by 156 nucleotideshsdS and hsdM overlap by 4 nucleotideshsdM and hsdR are separated by 200 nucleotideshsdR and mrr are separated by 187 nucleotidesmrr and yjiA are separated by 45 nucleotides b4342: yjiT - orf, hypothetical protein (VIMSS), at 4,570,437 to 4,571,939 yjiT b4486: yjiV - conserved protein (pseudogene) (RefSeq), at 4,571,942 to 4,574,878 yjiV b4345: mcrC - 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI), at 4,574,935 to 4,575,981 mcrC b4346: mcrB - component of McrBC 5-methylcytosine restriction system (VIMSS), at 4,575,981 to 4,577,360 mcrB b4347: yjiW - conserved protein (RefSeq), at 4,577,522 to 4,577,863 yjiW b4625: ryjC - Novel sRNA, function unknown (RefSeq), at 4,577,858 to 4,577,934 ryjC b4348: hsdS - specificity determinant for hsdM and hsdR (NCBI), at 4,578,091 to 4,579,485 hsdS b4349: hsdM - DNA methylase M (NCBI), at 4,579,482 to 4,581,071 hsdM b4350: hsdR - endonuclease R (RefSeq), at 4,581,272 to 4,584,784 hsdR b4351: mrr - methylated adenine and cytosine restriction protein (NCBI), at 4,584,972 to 4,585,886 mrr b4352: yjiA - orf, hypothetical protein (VIMSS), at 4,585,932 to 4,586,888 yjiA
Locus Name Description Strand Phenotype
b4342 yjiT orf, hypothetical protein (VIMSS) + insig.
b4486 yjiV conserved protein (pseudogene) (RefSeq) + insig.
b4345 mcrC 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) - sig.
b4346 mcrB component of McrBC 5-methylcytosine restriction system (VIMSS) - sig.
b4347 yjiW conserved protein (RefSeq) - insig.
b4625 ryjC Novel sRNA, function unknown (RefSeq) + insig.
b4348 hsdS specificity determinant for hsdM and hsdR (NCBI) - sig.
b4349 hsdM DNA methylase M (NCBI) - sig.
b4350 hsdR endonuclease R (RefSeq) - insig.
b4351 mrr methylated adenine and cytosine restriction protein (NCBI) + insig.
b4352 yjiA orf, hypothetical protein (VIMSS) - insig.

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