Gene info for b4609 in Escherichia coli BW25113

Name: ryfD
Annotation: Novel sRNA, function unknown (RefSeq)
Type 6: Other non-coding RNA
Located on scaffold 7023, - strand, nucleotides 2,732,175 to 2,732,317
See nucleotide sequence around b4609 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntrrfG and rrlG are separated by 92 nucleotidesrrlG and gltW are separated by 184 nucleotidesgltW and rrsG are separated by 171 nucleotidesrrsG and clpB are separated by 442 nucleotidesclpB and ryfD overlap by 21 nucleotidesryfD and yfiH are separated by 7 nucleotidesyfiH and rluD overlap by 4 nucleotidesrluD and yfiO are separated by 134 nucleotidesyfiO and yfiA are separated by 270 nucleotidesyfiA and pheL are separated by 103 nucleotides b2588: rrfG - 5S ribosomal RNA (NCBI), at 2,724,091 to 2,724,210 rrfG b2589: rrlG - 23S ribosomal RNA (NCBI), at 2,724,303 to 2,727,206 rrlG b2590: gltW - tRNA-Glu (NCBI), at 2,727,391 to 2,727,466 gltW b2591: rrsG - 16S ribosomal RNA (NCBI), at 2,727,638 to 2,729,179 rrsG b2592: clpB - protein disaggregation chaperone (NCBI), at 2,729,622 to 2,732,195 clpB b4609: ryfD - Novel sRNA, function unknown (RefSeq), at 2,732,175 to 2,732,317 ryfD b2593: yfiH - hypothetical protein (NCBI), at 2,732,325 to 2,733,056 yfiH b2594: rluD - 23S rRNA pseudouridine synthase (NCBI), at 2,733,053 to 2,734,033 rluD b2595: yfiO - predicted lipoprotein (NCBI), at 2,734,168 to 2,734,905 yfiO b2597: yfiA - cold shock protein associated with 30S ribosomal subunit (NCBI), at 2,735,176 to 2,735,517 yfiA b2598: pheL - pheA gene leader peptide (NCBI), at 2,735,621 to 2,735,668 pheL
Locus Name Description Strand Phenotype
b2588 rrfG 5S ribosomal RNA (NCBI) - no data
b2589 rrlG 23S ribosomal RNA (NCBI) - no data
b2590 gltW tRNA-Glu (NCBI) - no data
b2591 rrsG 16S ribosomal RNA (NCBI) - no data
b2592 clpB protein disaggregation chaperone (NCBI) - sig.
b4609 ryfD Novel sRNA, function unknown (RefSeq) - sig.
b2593 yfiH hypothetical protein (NCBI) - strong
b2594 rluD 23S rRNA pseudouridine synthase (NCBI) - no data
b2595 yfiO predicted lipoprotein (NCBI) + no data
b2597 yfiA cold shock protein associated with 30S ribosomal subunit (NCBI) + strong
b2598 pheL pheA gene leader peptide (NCBI) + no data

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