Gene info for b3278 in Escherichia coli BW25113

Name: rrsD
Annotation: 16S ribosomal RNA (NCBI)
Type 3: 16S (small subunit) ribosomal RNA
Located on scaffold 7023, - strand, nucleotides 3,425,243 to 3,426,784
See nucleotide sequence around b3278 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntthrV and rrfD are separated by 12 nucleotidesrrfD and rrlD are separated by 92 nucleotidesrrlD and alaU are separated by 174 nucleotidesalaU and ileU are separated by 42 nucleotidesileU and rrsD are separated by 68 nucleotidesrrsD and yrdA are separated by 473 nucleotidesyrdA and yrdB overlap by 25 nucleotidesyrdB and aroE overlap by 4 nucleotidesaroE and yrdC are separated by 4 nucleotidesyrdC and yrdD are separated by 4 nucleotides b3273: thrV - tRNA-Thr (NCBI), at 3,421,602 to 3,421,677 thrV b3274: rrfD - 5S ribosomal RNA (NCBI), at 3,421,690 to 3,421,809 rrfD b3275: rrlD - 23S ribosomal RNA (NCBI), at 3,421,902 to 3,424,805 rrlD b3276: alaU - tRNA-Ala (NCBI), at 3,424,980 to 3,425,055 alaU b3277: ileU - tRNA-Ile (NCBI), at 3,425,098 to 3,425,174 ileU b3278: rrsD - 16S ribosomal RNA (NCBI), at 3,425,243 to 3,426,784 rrsD b3279: yrdA - putative transferase (VIMSS), at 3,427,258 to 3,427,812 yrdA b3280: yrdB - hypothetical protein (NCBI), at 3,427,788 to 3,428,045 yrdB b3281: aroE - dehydroshikimate reductase, NAD(P)-binding (NCBI), at 3,428,042 to 3,428,860 aroE b3282: yrdC - predicted ribosome maturation factor (NCBI), at 3,428,865 to 3,429,437 yrdC b3283: yrdD - predicted DNA topoisomerase (NCBI), at 3,429,442 to 3,429,984 yrdD
Locus Name Description Strand Phenotype
b3273 thrV tRNA-Thr (NCBI) - no data
b3274 rrfD 5S ribosomal RNA (NCBI) - no data
b3275 rrlD 23S ribosomal RNA (NCBI) - no data
b3276 alaU tRNA-Ala (NCBI) - no data
b3277 ileU tRNA-Ile (NCBI) - no data
b3278 rrsD 16S ribosomal RNA (NCBI) - no data
b3279 yrdA putative transferase (VIMSS) + sig.
b3280 yrdB hypothetical protein (NCBI) - sig.
b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) - strong
b3282 yrdC predicted ribosome maturation factor (NCBI) - no data
b3283 yrdD predicted DNA topoisomerase (NCBI) - sig.

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