Gene info for b4545 in Escherichia coli BW25113

Name: ypdJ
Annotation: no description
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, + strand, nucleotides 2,474,203 to 2,474,253
See nucleotide sequence around b4545 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntyfdP and yfdQ are separated by 65 nucleotidesyfdQ and b2361 are separated by 127 nucleotidesb2361 and yfdS overlap by 10 nucleotidesyfdS and yfdT overlap by 1 nucleotidesyfdT and ypdJ are separated by 2 nucleotidesypdJ and torI are separated by 78 nucleotidestorI and pawZ are separated by 73 nucleotidespawZ and dsdC are separated by 95 nucleotidesdsdC and dsdX are separated by 217 nucleotidesdsdX and dsdA are separated by 17 nucleotides b2359: yfdP - CPS-53 (KpLE1) prophage; predicted protein (RefSeq), at 2,471,626 to 2,471,988 yfdP b2360: yfdQ - CPS-53 (KpLE1) prophage; predicted protein (NCBI), at 2,472,054 to 2,472,878 yfdQ b2361: b2361 - orf, hypothetical protein (VIMSS), at 2,473,006 to 2,473,542 b2361 b2362: yfdS - CPS-53 (KpLE1) prophage; predicted protein (NCBI), at 2,473,533 to 2,473,895 yfdS b2363: yfdT - CPS-53 (KpLE1) prophage; predicted protein (NCBI), at 2,473,895 to 2,474,200 yfdT b4545: ypdJ - no description, at 2,474,203 to 2,474,253 ypdJ b4501: torI - response regulator inhibitor for tor operon (NCBI), at 2,474,332 to 2,474,532 torI b4643: pawZ - tRNA-OTHER (RefSeq), at 2,474,606 to 2,474,620 pawZ b2364: dsdC - DNA-binding transcriptional dual regulator (NCBI), at 2,474,716 to 2,475,651 dsdC b2365: dsdX - predicted transporter (NCBI), at 2,475,869 to 2,477,206 dsdX b2366: dsdA - D-serine dehydratase (NCBI), at 2,477,224 to 2,478,552 dsdA
Locus Name Description Strand Phenotype
b2359 yfdP CPS-53 (KpLE1) prophage; predicted protein (RefSeq) + sig.
b2360 yfdQ CPS-53 (KpLE1) prophage; predicted protein (NCBI) + insig.
b2361 b2361 orf, hypothetical protein (VIMSS) + insig.
b2362 yfdS CPS-53 (KpLE1) prophage; predicted protein (NCBI) + sig.
b2363 yfdT CPS-53 (KpLE1) prophage; predicted protein (NCBI) + sig.
b4545 ypdJ no description + sig.
b4501 torI response regulator inhibitor for tor operon (NCBI) + insig.
b4643 pawZ tRNA-OTHER (RefSeq) + no data
b2364 dsdC DNA-binding transcriptional dual regulator (NCBI) - strong
b2365 dsdX predicted transporter (NCBI) + insig.
b2366 dsdA D-serine dehydratase (NCBI) + strong

Or browse nearby genes