Gene info for b4498 in Escherichia coli BW25113

Name: gatR
Annotation: no description
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, - strand, nucleotides 2,167,717 to 2,168,191
See nucleotide sequence around b4498 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntcyaR and ogrK are separated by 101 nucleotidesogrK and yegZ are separated by 81 nucleotidesyegZ and b2085 are separated by 174 nucleotidesb2085 and yegS are separated by 405 nucleotidesyegS and gatR are separated by 81 nucleotidesgatR and insE are separated by 68 nucleotidesinsE and insF-5 overlap by 4 nucleotidesinsF-5 and gatD are separated by 434 nucleotidesgatD and gatC are separated by 47 nucleotidesgatC and gatB are separated by 3 nucleotides b4438: cyaR - sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq), at 2,165,138 to 2,165,224 cyaR b2082: ogrK - DNA-binding transcriptional regulator prophage P2 remnant (NCBI), at 2,165,326 to 2,165,544 ogrK b2083: yegZ - orf, hypothetical protein (VIMSS), at 2,165,626 to 2,165,838 yegZ b2085: b2085 - orf, hypothetical protein (VIMSS), at 2,166,013 to 2,166,330 b2085 b2086: yegS - hypothetical protein (NCBI), at 2,166,736 to 2,167,635 yegS b4498: gatR - no description, at 2,167,717 to 2,168,191 gatR b2088: insE - IS3 element protein InsE (RefSeq), at 2,168,260 to 2,168,559 insE b2089: insF-5 - IS3 element protein InsF (NCBI), at 2,168,556 to 2,169,422 insF-5 b2091: gatD - galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding (NCBI), at 2,169,857 to 2,170,897 gatD b2092: gatC - galactitol-specific enzyme IIC component of PTS (NCBI), at 2,170,945 to 2,172,300 gatC b2093: gatB - galactitol-specific enzyme IIB component of PTS (NCBI), at 2,172,304 to 2,172,588 gatB
Locus Name Description Strand Phenotype
b4438 cyaR sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) + strong
b2082 ogrK DNA-binding transcriptional regulator prophage P2 remnant (NCBI) - sig.
b2083 yegZ orf, hypothetical protein (VIMSS) - insig.
b2085 b2085 orf, hypothetical protein (VIMSS) - sig.
b2086 yegS hypothetical protein (NCBI) + insig.
b4498 gatR no description - insig.
b2088 insE IS3 element protein InsE (RefSeq) + no data
b2089 insF-5 IS3 element protein InsF (NCBI) + no data
b2091 gatD galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding (NCBI) - insig.
b2092 gatC galactitol-specific enzyme IIC component of PTS (NCBI) - strong
b2093 gatB galactitol-specific enzyme IIB component of PTS (NCBI) - strong

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