Gene info for b4438 in Escherichia coli BW25113

Name: cyaR
Annotation: sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq)
Type 6: Other non-coding RNA
Located on scaffold 7023, + strand, nucleotides 2,165,138 to 2,165,224
See nucleotide sequence around b4438 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntmdtD and baeS overlap by 4 nucleotidesbaeS and baeR overlap by 4 nucleotidesbaeR and b2080 are separated by 190 nucleotidesb2080 and yegQ are separated by 146 nucleotidesyegQ and cyaR are separated by 84 nucleotidescyaR and ogrK are separated by 101 nucleotidesogrK and yegZ are separated by 81 nucleotidesyegZ and b2085 are separated by 174 nucleotidesb2085 and yegS are separated by 405 nucleotidesyegS and gatR are separated by 81 nucleotides b2077: mdtD - multidrug efflux system protein (NCBI), at 2,159,488 to 2,160,903 mdtD b2078: baeS - sensory histidine kinase in two-component regulatory system with BaeR (NCBI), at 2,160,900 to 2,162,303 baeS b2079: baeR - DNA-binding response regulator in two-component regulatory system with BaeS (NCBI), at 2,162,300 to 2,163,022 baeR b2080: b2080 - orf, hypothetical protein (VIMSS), at 2,163,213 to 2,163,545 b2080 b2081: yegQ - predicted peptidase (NCBI), at 2,163,692 to 2,165,053 yegQ b4438: cyaR - sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq), at 2,165,138 to 2,165,224 cyaR b2082: ogrK - DNA-binding transcriptional regulator prophage P2 remnant (NCBI), at 2,165,326 to 2,165,544 ogrK b2083: yegZ - orf, hypothetical protein (VIMSS), at 2,165,626 to 2,165,838 yegZ b2085: b2085 - orf, hypothetical protein (VIMSS), at 2,166,013 to 2,166,330 b2085 b2086: yegS - hypothetical protein (NCBI), at 2,166,736 to 2,167,635 yegS b4498: gatR - no description, at 2,167,717 to 2,168,191 gatR
Locus Name Description Strand Phenotype
b2077 mdtD multidrug efflux system protein (NCBI) + insig.
b2078 baeS sensory histidine kinase in two-component regulatory system with BaeR (NCBI) + strong
b2079 baeR DNA-binding response regulator in two-component regulatory system with BaeS (NCBI) + sig.
b2080 b2080 orf, hypothetical protein (VIMSS) + strong
b2081 yegQ predicted peptidase (NCBI) + sig.
b4438 cyaR sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) + strong
b2082 ogrK DNA-binding transcriptional regulator prophage P2 remnant (NCBI) - sig.
b2083 yegZ orf, hypothetical protein (VIMSS) - insig.
b2085 b2085 orf, hypothetical protein (VIMSS) - sig.
b2086 yegS hypothetical protein (NCBI) + insig.
b4498 gatR no description - insig.

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