Gene info for b4425 in Escherichia coli BW25113

Name: rttR
Annotation: regulatory sRNA (NCBI)
Type 6: Other non-coding RNA
Located on scaffold 7023, - strand, nucleotides 1,286,289 to 1,286,459
See nucleotide sequence around b4425 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntnarK and narG are separated by 515 nucleotidesnarG and narH overlap by 4 nucleotidesnarH and narJ overlap by 4 nucleotidesnarJ and narI overlap by 1 nucleotidesnarI and rttR are separated by 539 nucleotidesrttR and tpr overlap by 150 nucleotidestpr and tyrV are separated by 67 nucleotidestyrV and tyrT are separated by 209 nucleotidestyrT and purU are separated by 159 nucleotidespurU and ychJ are separated by 49 nucleotides b1223: narK - nitrate/nitrite transporter (NCBI), at 1,277,180 to 1,278,571 narK b1224: narG - nitrate reductase 1, alpha subunit (NCBI), at 1,279,087 to 1,282,830 narG b1225: narH - nitrate reductase 1, beta (Fe-S) subunit (NCBI), at 1,282,827 to 1,284,365 narH b1226: narJ - molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 (NCBI), at 1,284,362 to 1,285,072 narJ b1227: narI - nitrate reductase 1, gamma (cytochrome b(NR)) subunit (NCBI), at 1,285,072 to 1,285,749 narI b4425: rttR - regulatory sRNA (NCBI), at 1,286,289 to 1,286,459 rttR b1229: tpr - predicted protamine-like protein (RefSeq), at 1,286,310 to 1,286,399 tpr b1230: tyrV - tRNA-Tyr (NCBI), at 1,286,467 to 1,286,551 tyrV b1231: tyrT - tRNA-Tyr (NCBI), at 1,286,761 to 1,286,845 tyrT b1232: purU - formyltetrahydrofolate deformylase (NCBI), at 1,287,005 to 1,287,847 purU b1233: ychJ - hypothetical protein (NCBI), at 1,287,897 to 1,288,355 ychJ
Locus Name Description Strand Phenotype
b1223 narK nitrate/nitrite transporter (NCBI) + strong
b1224 narG nitrate reductase 1, alpha subunit (NCBI) + sig.
b1225 narH nitrate reductase 1, beta (Fe-S) subunit (NCBI) + sig.
b1226 narJ molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 (NCBI) + sig.
b1227 narI nitrate reductase 1, gamma (cytochrome b(NR)) subunit (NCBI) + insig.
b4425 rttR regulatory sRNA (NCBI) - no data
b1229 tpr predicted protamine-like protein (RefSeq) - no data
b1230 tyrV tRNA-Tyr (NCBI) - no data
b1231 tyrT tRNA-Tyr (NCBI) - insig.
b1232 purU formyltetrahydrofolate deformylase (NCBI) - strong
b1233 ychJ hypothetical protein (NCBI) - strong

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