Gene info for b4413 in Escherichia coli BW25113

Name: sokC
Annotation: regulatory antisense RNA (NCBI)
Type 6: Other non-coding RNA
Located on scaffold 7023, + strand, nucleotides 16,952 to 17,006
See nucleotide sequence around b4413 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntdnaK and dnaJ are separated by 88 nucleotidesdnaJ and insL-1 are separated by 146 nucleotidesinsL-1 and mokC are separated by 193 nucleotidesmokC and hokC overlap by 210 nucleotideshokC and sokC are separated by 48 nucleotidessokC and nhaA are separated by 482 nucleotidesnhaA and nhaR are separated by 59 nucleotidesnhaR and insB-1 are separated by 190 nucleotidesinsB-1 and insA-1 overlap by 82 nucleotidesinsA-1 and rpsT are separated by 306 nucleotides b0014: dnaK - molecular chaperone DnaK (NCBI), at 12,163 to 14,079 dnaK b0015: dnaJ - chaperone Hsp40, co-chaperone with DnaK (NCBI), at 14,168 to 15,298 dnaJ b0016: insL-1 - IS186/IS421 transposase (NCBI), at 15,445 to 16,557 insL-1 b0018: mokC - regulatory protein for HokC, overlaps CDS of hokC (NCBI), at 16,751 to 16,960 mokC b4412: hokC - toxic membrane protein, small (NCBI), at 16,751 to 16,903 hokC b4413: sokC - regulatory antisense RNA (NCBI), at 16,952 to 17,006 sokC b0019: nhaA - pH-dependent sodium/proton antiporter (NCBI), at 17,489 to 18,655 nhaA b0020: nhaR - DNA-binding transcriptional activator (NCBI), at 18,715 to 19,620 nhaR b0021: insB-1 - IS1 transposase InsAB' (NCBI), at 19,811 to 20,314 insB-1 b0022: insA-1 - IS1 repressor protein InsA (NCBI), at 20,233 to 20,508 insA-1 b0023: rpsT - 30S ribosomal protein S20 (NCBI), at 20,815 to 21,078 rpsT
Locus Name Description Strand Phenotype
b0014 dnaK molecular chaperone DnaK (NCBI) + strong
b0015 dnaJ chaperone Hsp40, co-chaperone with DnaK (NCBI) + strong
b0016 insL-1 IS186/IS421 transposase (NCBI) + no data
b0018 mokC regulatory protein for HokC, overlaps CDS of hokC (NCBI) - insig.
b4412 hokC toxic membrane protein, small (NCBI) - no data
b4413 sokC regulatory antisense RNA (NCBI) + sig.
b0019 nhaA pH-dependent sodium/proton antiporter (NCBI) + strong
b0020 nhaR DNA-binding transcriptional activator (NCBI) + strong
b0021 insB-1 IS1 transposase InsAB' (NCBI) - no data
b0022 insA-1 IS1 repressor protein InsA (NCBI) - no data
b0023 rpsT 30S ribosomal protein S20 (NCBI) - no data

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