Gene info for b4172 in Escherichia coli BW25113

Name: hfq
Annotation: RNA-binding protein Hfq (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 4,398,311 to 4,398,619
See nucleotide sequence around b4172 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646316163, uniprot: P0A6X3

Nearby Genes

500 ntyjeF and yjeE overlap by 29 nucleotidesyjeE and amiB are separated by 18 nucleotidesamiB and mutL are separated by 9 nucleotidesmutL and miaA overlap by 8 nucleotidesmiaA and hfq are separated by 85 nucleotideshfq and hflX are separated by 75 nucleotideshflX and hflK are separated by 85 nucleotideshflK and hflC are separated by 2 nucleotideshflC and yjeT are separated by 81 nucleotidesyjeT and purA are separated by 103 nucleotides b4167: yjeF - predicted carbohydrate kinase (NCBI), at 4,392,089 to 4,393,636 yjeF b4168: yjeE - ATPase with strong ADP affinity (NCBI), at 4,393,608 to 4,394,069 yjeE b4169: amiB - N-acetylmuramoyl-l-alanine amidase II (NCBI), at 4,394,088 to 4,395,425 amiB b4170: mutL - DNA mismatch repair protein (NCBI), at 4,395,435 to 4,397,282 mutL b4171: miaA - tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI), at 4,397,275 to 4,398,225 miaA b4172: hfq - RNA-binding protein Hfq (NCBI), at 4,398,311 to 4,398,619 hfq b4173: hflX - predicted GTPase (NCBI), at 4,398,695 to 4,399,975 hflX b4174: hflK - modulator for HflB protease specific for phage lambda cII repressor (NCBI), at 4,400,061 to 4,401,320 hflK b4175: hflC - modulator for HflB protease specific for phage lambda cII repressor (NCBI), at 4,401,323 to 4,402,327 hflC b4176: yjeT - conserved inner membrane protein (NCBI), at 4,402,409 to 4,402,606 yjeT b4177: purA - adenylosuccinate synthetase (NCBI), at 4,402,710 to 4,404,008 purA
Locus Name Description Strand Phenotype
b4167 yjeF predicted carbohydrate kinase (NCBI) + insig.
b4168 yjeE ATPase with strong ADP affinity (NCBI) + no data
b4169 amiB N-acetylmuramoyl-l-alanine amidase II (NCBI) + strong
b4170 mutL DNA mismatch repair protein (NCBI) + sig.
b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) + strong
b4172 hfq RNA-binding protein Hfq (NCBI) + strong
b4173 hflX predicted GTPase (NCBI) + sig.
b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) + strong
b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) + strong
b4176 yjeT conserved inner membrane protein (NCBI) + sig.
b4177 purA adenylosuccinate synthetase (NCBI) + strong

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