Gene info for b3998 in Escherichia coli BW25113

Name: nfi
Annotation: endonuclease V (deoxyinosine 3'endoduclease) (VIMSS)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 4,196,813 to 4,197,484
See nucleotide sequence around b3998 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315981, uniprot: P68739

Nearby Genes

500 ntthiE and thiC overlap by 1 nucleotidesthiC and rsd are separated by 232 nucleotidesrsd and nudC are separated by 94 nucleotidesnudC and hemE are separated by 39 nucleotideshemE and nfi are separated by 9 nucleotidesnfi and yjaG are separated by 42 nucleotidesyjaG and hupA are separated by 186 nucleotideshupA and yjaH are separated by 12 nucleotidesyjaH and yjaI are separated by 1 nucleotidesyjaI and zraS are separated by 237 nucleotides b3993: thiE - thiamine-phosphate pyrophosphorylase (NCBI), at 4,191,592 to 4,192,227 thiE b3994: thiC - thiamine biosynthesis protein ThiC (NCBI), at 4,192,227 to 4,194,122 thiC b3995: rsd - stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI), at 4,194,355 to 4,194,831 rsd b3996: nudC - NADH pyrophosphatase (NCBI), at 4,194,926 to 4,195,699 nudC b3997: hemE - uroporphyrinogen decarboxylase (NCBI), at 4,195,739 to 4,196,803 hemE b3998: nfi - endonuclease V (deoxyinosine 3'endoduclease) (VIMSS), at 4,196,813 to 4,197,484 nfi b3999: yjaG - hypothetical protein (NCBI), at 4,197,527 to 4,198,117 yjaG b4000: hupA - HU, DNA-binding transcriptional regulator, alpha subunit (NCBI), at 4,198,304 to 4,198,576 hupA b4001: yjaH - hypothetical protein (NCBI), at 4,198,589 to 4,199,284 yjaH b4002: yjaI - orf, hypothetical protein (VIMSS), at 4,199,286 to 4,199,711 yjaI b4003: zraS - sensory histidine kinase in two-component regulatory system with ZraR (NCBI), at 4,199,949 to 4,201,346 zraS
Locus Name Description Strand Phenotype
b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) - strong
b3994 thiC thiamine biosynthesis protein ThiC (NCBI) - strong
b3995 rsd stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) - sig.
b3996 nudC NADH pyrophosphatase (NCBI) + strong
b3997 hemE uroporphyrinogen decarboxylase (NCBI) + no data
b3998 nfi endonuclease V (deoxyinosine 3'endoduclease) (VIMSS) + sig.
b3999 yjaG hypothetical protein (NCBI) + strong
b4000 hupA HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) + strong
b4001 yjaH hypothetical protein (NCBI) + strong
b4002 yjaI orf, hypothetical protein (VIMSS) - insig.
b4003 zraS sensory histidine kinase in two-component regulatory system with ZraR (NCBI) + insig.

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