Gene info for b3965 in Escherichia coli BW25113

Name: trmA
Annotation: tRNA (uracil-5-)-methyltransferase (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 4,160,193 to 4,161,293
See nucleotide sequence around b3965 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315947, uniprot: P23003

Nearby Genes

500 ntoxyS and oxyR are separated by 95 nucleotidesoxyR and udhA overlap by 18 nucleotidesudhA and fabR are separated by 333 nucleotidesfabR and yijD overlap by 1 nucleotidesyijD and trmA are separated by 39 nucleotidestrmA and btuB are separated by 368 nucleotidesbtuB and murI overlap by 56 nucleotidesmurI and rrsB are separated by 373 nucleotidesrrsB and gltT are separated by 171 nucleotidesgltT and rrlB are separated by 193 nucleotides b4458: oxyS - global regulatory RNA (NCBI), at 4,156,308 to 4,156,417 oxyS b3961: oxyR - DNA-binding transcriptional dual regulator (NCBI), at 4,156,513 to 4,157,430 oxyR b3962: udhA - putative oxidoreductase (VIMSS), at 4,157,413 to 4,158,813 udhA b3963: fabR - DNA-binding transcriptional repressor (RefSeq), at 4,159,147 to 4,159,794 fabR b3964: yijD - conserved inner membrane protein (NCBI), at 4,159,794 to 4,160,153 yijD b3965: trmA - tRNA (uracil-5-)-methyltransferase (NCBI), at 4,160,193 to 4,161,293 trmA b3966: btuB - vitamin B12/cobalamin outer membrane transporter (NCBI), at 4,161,662 to 4,163,506 btuB b3967: murI - glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS), at 4,163,451 to 4,164,308 murI b3968: rrsB - 16S ribosomal RNA (NCBI), at 4,164,682 to 4,166,223 rrsB b3969: gltT - tRNA-Glu (NCBI), at 4,166,395 to 4,166,470 gltT b3970: rrlB - 23S ribosomal RNA (NCBI), at 4,166,664 to 4,169,567 rrlB
Locus Name Description Strand Phenotype
b4458 oxyS global regulatory RNA (NCBI) - insig.
b3961 oxyR DNA-binding transcriptional dual regulator (NCBI) + strong
b3962 udhA putative oxidoreductase (VIMSS) - strong
b3963 fabR DNA-binding transcriptional repressor (RefSeq) + strong
b3964 yijD conserved inner membrane protein (NCBI) + sig.
b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) - sig.
b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) + sig.
b3967 murI glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS) + no data
b3968 rrsB 16S ribosomal RNA (NCBI) + no data
b3969 gltT tRNA-Glu (NCBI) + no data
b3970 rrlB 23S ribosomal RNA (NCBI) + no data

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