Gene info for b3625 in Escherichia coli BW25113

Name: rfaY
Annotation: lipopolysaccharide core biosynthesis protein (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 3,798,290 to 3,798,988
See nucleotide sequence around b3625 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315606, uniprot: P27240

Nearby Genes

500 ntrfaF and rfaC are separated by 3 nucleotidesrfaC and rfaL are separated by 9 nucleotidesrfaL and rfaK are separated by 31 nucleotidesrfaK and rfaZ are separated by 32 nucleotidesrfaZ and rfaY are separated by 70 nucleotidesrfaY and rfaJ are separated by 17 nucleotidesrfaJ and rfaI are separated by 39 nucleotidesrfaI and rfaB overlap by 1 nucleotidesrfaB and rfaS are separated by 43 nucleotidesrfaS and rfaP are separated by 36 nucleotides b3620: rfaF - ADP-heptose:LPS heptosyltransferase II (NCBI), at 3,792,952 to 3,793,998 rfaF b3621: rfaC - ADP-heptose:LPS heptosyl transferase I (NCBI), at 3,794,002 to 3,794,961 rfaC b3622: rfaL - O-antigen ligase (NCBI), at 3,794,971 to 3,796,230 rfaL b3623: rfaK - lipopolysaccharide core biosynthesis (NCBI), at 3,796,262 to 3,797,335 rfaK b3624: rfaZ - lipopolysaccharide core biosynthesis protein (NCBI), at 3,797,368 to 3,798,219 rfaZ b3625: rfaY - lipopolysaccharide core biosynthesis protein (NCBI), at 3,798,290 to 3,798,988 rfaY b3626: rfaJ - UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI), at 3,799,006 to 3,800,022 rfaJ b3627: rfaI - UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI), at 3,800,062 to 3,801,081 rfaI b3628: rfaB - UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq), at 3,801,081 to 3,802,160 rfaB b3629: rfaS - lipopolysaccharide core biosynthesis protein (NCBI), at 3,802,204 to 3,803,139 rfaS b3630: rfaP - kinase that phosphorylates core heptose of lipopolysaccharide (NCBI), at 3,803,176 to 3,803,973 rfaP
Locus Name Description Strand Phenotype
b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) + strong
b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) + strong
b3622 rfaL O-antigen ligase (NCBI) + strong
b3623 rfaK lipopolysaccharide core biosynthesis (NCBI) - strong
b3624 rfaZ lipopolysaccharide core biosynthesis protein (NCBI) - strong
b3625 rfaY lipopolysaccharide core biosynthesis protein (NCBI) - strong
b3626 rfaJ UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) - strong
b3627 rfaI UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) - strong
b3628 rfaB UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) - strong
b3629 rfaS lipopolysaccharide core biosynthesis protein (NCBI) - strong
b3630 rfaP kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) - strong

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