Gene info for b3543 in Escherichia coli BW25113

Name: dppB
Updated annotation (from data): dipeptide ABC transporter, membrane subunit (DppB)
Rationale: Specific phenotype: utilization of Gly-DL-Asp, Gly-Glu
Original annotation: dipeptide transporter (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 3,702,794 to 3,703,813
See nucleotide sequence around b3543 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315513, uniprot: P0AEF8

Nearby Genes

500 ntrdlD and yhjV are separated by 361 nucleotidesyhjV and dppF are separated by 29 nucleotidesdppF and dppD overlap by 4 nucleotidesdppD and dppC are separated by 10 nucleotidesdppC and dppB are separated by 9 nucleotidesdppB and dppA are separated by 307 nucleotidesdppA and proK are separated by 910 nucleotidesproK and yhjW are separated by 91 nucleotidesyhjW and yhjX are separated by 323 nucleotidesyhjX and yhjY are separated by 228 nucleotides b4454: rdlD - sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR-D repeat, with toxic peptide LdrD (RefSeq), at 3,698,159 to 3,698,224 rdlD b3539: yhjV - predicted transporter (NCBI), at 3,698,586 to 3,699,857 yhjV b3540: dppF - dipeptide transporter (NCBI), at 3,699,887 to 3,700,891 dppF b3541: dppD - dipeptide transporter (NCBI), at 3,700,888 to 3,701,871 dppD b3542: dppC - dipeptide transporter (NCBI), at 3,701,882 to 3,702,784 dppC b3543: dppB - dipeptide ABC transporter, membrane subunit (DppB) (from data), at 3,702,794 to 3,703,813 dppB b3544: dppA - dipeptide transporter (NCBI), at 3,704,121 to 3,705,728 dppA b3545: proK - tRNA-Pro (NCBI), at 3,706,639 to 3,706,715 proK b3546: yhjW - orf, hypothetical protein (VIMSS), at 3,706,807 to 3,708,498 yhjW b3547: yhjX - predicted transporter (NCBI), at 3,708,822 to 3,710,030 yhjX b3548: yhjY - putative lipase (VIMSS), at 3,710,259 to 3,710,957 yhjY
Locus Name Description Strand Phenotype
b4454 rdlD sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR-D repeat, with toxic peptide LdrD (RefSeq) + insig.
b3539 yhjV predicted transporter (NCBI) + insig.
b3540 dppF dipeptide transporter (NCBI) - sig.
b3541 dppD dipeptide transporter (NCBI) - sig.
b3542 dppC dipeptide transporter (NCBI) - sig.
b3543 dppB dipeptide ABC transporter, membrane subunit (DppB) (from data) - sig.
b3544 dppA dipeptide transporter (NCBI) - sig.
b3545 proK tRNA-Pro (NCBI) - strong
b3546 yhjW orf, hypothetical protein (VIMSS) - sig.
b3547 yhjX predicted transporter (NCBI) - insig.
b3548 yhjY putative lipase (VIMSS) - insig.

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