Gene info for b3422 in Escherichia coli BW25113

Name: rtcR
Annotation: sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 3,556,290 to 3,557,888
See nucleotide sequence around b3422 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315387, uniprot: P38035

Nearby Genes

500 ntmalQ and malP are separated by 9 nucleotidesmalP and malT are separated by 611 nucleotidesmalT and rtcA are separated by 42 nucleotidesrtcA and rtcB are separated by 3 nucleotidesrtcB and rtcR are separated by 188 nucleotidesrtcR and glpR overlap by 19 nucleotidesglpR and glpG are separated by 16 nucleotidesglpG and glpE are separated by 44 nucleotidesglpE and glpD are separated by 189 nucleotidesglpD and yzgL are separated by 268 nucleotides b3416: malQ - 4-alpha-glucanotransferase (amylomaltase) (NCBI), at 3,546,008 to 3,548,092 malQ b3417: malP - maltodextrin phosphorylase (NCBI), at 3,548,102 to 3,550,495 malP b3418: malT - transcriptional regulator MalT (NCBI), at 3,551,107 to 3,553,812 malT b4475: rtcA - RNA 3'-terminal-phosphate cyclase (NCBI), at 3,553,855 to 3,554,871 rtcA b3421: rtcB - hypothetical protein (NCBI), at 3,554,875 to 3,556,101 rtcB b3422: rtcR - sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI), at 3,556,290 to 3,557,888 rtcR b3423: glpR - DNA-binding transcriptional repressor (NCBI), at 3,557,870 to 3,558,628 glpR b3424: glpG - predicted intramembrane serine protease (NCBI), at 3,558,645 to 3,559,475 glpG b3425: glpE - thiosulfate sulfurtransferase (NCBI), at 3,559,520 to 3,559,846 glpE b3426: glpD - sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI), at 3,560,036 to 3,561,541 glpD b3427: yzgL - orf, hypothetical protein (VIMSS), at 3,561,810 to 3,562,028 yzgL
Locus Name Description Strand Phenotype
b3416 malQ 4-alpha-glucanotransferase (amylomaltase) (NCBI) - strong
b3417 malP maltodextrin phosphorylase (NCBI) - strong
b3418 malT transcriptional regulator MalT (NCBI) + strong
b4475 rtcA RNA 3'-terminal-phosphate cyclase (NCBI) - insig.
b3421 rtcB hypothetical protein (NCBI) - insig.
b3422 rtcR sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI) + sig.
b3423 glpR DNA-binding transcriptional repressor (NCBI) - strong
b3424 glpG predicted intramembrane serine protease (NCBI) - strong
b3425 glpE thiosulfate sulfurtransferase (NCBI) - sig.
b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) + strong
b3427 yzgL orf, hypothetical protein (VIMSS) - insig.

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