Gene info for b3287 in Escherichia coli BW25113

Name: def
Annotation: peptide deformylase (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 3,431,712 to 3,432,221
See nucleotide sequence around b3287 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315252, uniprot: P0A6K3

Nearby Genes

500 ntaroE and yrdC are separated by 4 nucleotidesyrdC and yrdD are separated by 4 nucleotidesyrdD and smg are separated by 28 nucleotidessmg and smf overlap by 29 nucleotidessmf and def are separated by 129 nucleotidesdef and fmt are separated by 14 nucleotidesfmt and rsmB are separated by 45 nucleotidesrsmB and trkA are separated by 21 nucleotidestrkA and mscL are separated by 129 nucleotidesmscL and yhdL overlap by 4 nucleotides b3281: aroE - dehydroshikimate reductase, NAD(P)-binding (NCBI), at 3,428,042 to 3,428,860 aroE b3282: yrdC - predicted ribosome maturation factor (NCBI), at 3,428,865 to 3,429,437 yrdC b3283: yrdD - predicted DNA topoisomerase (NCBI), at 3,429,442 to 3,429,984 yrdD b3284: smg - hypothetical protein (NCBI), at 3,430,013 to 3,430,486 smg b4473: smf - hypothetical protein (NCBI), at 3,430,458 to 3,431,582 smf b3287: def - peptide deformylase (NCBI), at 3,431,712 to 3,432,221 def b3288: fmt - methionyl-tRNA formyltransferase (NCBI), at 3,432,236 to 3,433,183 fmt b3289: rsmB - 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI), at 3,433,229 to 3,434,518 rsmB b3290: trkA - potassium transporter peripheral membrane component (NCBI), at 3,434,540 to 3,435,916 trkA b3291: mscL - large-conductance mechanosensitive channel (NCBI), at 3,436,046 to 3,436,456 mscL b4550: yhdL - hypothetical protein (NCBI), at 3,436,453 to 3,436,671 yhdL
Locus Name Description Strand Phenotype
b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) - strong
b3282 yrdC predicted ribosome maturation factor (NCBI) - no data
b3283 yrdD predicted DNA topoisomerase (NCBI) - sig.
b3284 smg hypothetical protein (NCBI) - sig.
b4473 smf hypothetical protein (NCBI) - insig.
b3287 def peptide deformylase (NCBI) + no data
b3288 fmt methionyl-tRNA formyltransferase (NCBI) + no data
b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) + strong
b3290 trkA potassium transporter peripheral membrane component (NCBI) + strong
b3291 mscL large-conductance mechanosensitive channel (NCBI) + sig.
b4550 yhdL hypothetical protein (NCBI) - strong

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