Gene info for b3282 in Escherichia coli BW25113

Name: yrdC
Annotation: predicted ribosome maturation factor (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 3,428,865 to 3,429,437
See nucleotide sequence around b3282 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315248, uniprot: P45748

Nearby Genes

500 ntileU and rrsD are separated by 68 nucleotidesrrsD and yrdA are separated by 473 nucleotidesyrdA and yrdB overlap by 25 nucleotidesyrdB and aroE overlap by 4 nucleotidesaroE and yrdC are separated by 4 nucleotidesyrdC and yrdD are separated by 4 nucleotidesyrdD and smg are separated by 28 nucleotidessmg and smf overlap by 29 nucleotidessmf and def are separated by 129 nucleotidesdef and fmt are separated by 14 nucleotides b3277: ileU - tRNA-Ile (NCBI), at 3,425,098 to 3,425,174 ileU b3278: rrsD - 16S ribosomal RNA (NCBI), at 3,425,243 to 3,426,784 rrsD b3279: yrdA - putative transferase (VIMSS), at 3,427,258 to 3,427,812 yrdA b3280: yrdB - hypothetical protein (NCBI), at 3,427,788 to 3,428,045 yrdB b3281: aroE - dehydroshikimate reductase, NAD(P)-binding (NCBI), at 3,428,042 to 3,428,860 aroE b3282: yrdC - predicted ribosome maturation factor (NCBI), at 3,428,865 to 3,429,437 yrdC b3283: yrdD - predicted DNA topoisomerase (NCBI), at 3,429,442 to 3,429,984 yrdD b3284: smg - hypothetical protein (NCBI), at 3,430,013 to 3,430,486 smg b4473: smf - hypothetical protein (NCBI), at 3,430,458 to 3,431,582 smf b3287: def - peptide deformylase (NCBI), at 3,431,712 to 3,432,221 def b3288: fmt - methionyl-tRNA formyltransferase (NCBI), at 3,432,236 to 3,433,183 fmt
Locus Name Description Strand Phenotype
b3277 ileU tRNA-Ile (NCBI) - no data
b3278 rrsD 16S ribosomal RNA (NCBI) - no data
b3279 yrdA putative transferase (VIMSS) + sig.
b3280 yrdB hypothetical protein (NCBI) - sig.
b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) - strong
b3282 yrdC predicted ribosome maturation factor (NCBI) - no data
b3283 yrdD predicted DNA topoisomerase (NCBI) - sig.
b3284 smg hypothetical protein (NCBI) - sig.
b4473 smf hypothetical protein (NCBI) - insig.
b3287 def peptide deformylase (NCBI) + no data
b3288 fmt methionyl-tRNA formyltransferase (NCBI) + no data

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