Gene info for b3129 in Escherichia coli BW25113

Name: sohA
Annotation: predicted regulator (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 3,275,024 to 3,275,359
See nucleotide sequence around b3129 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315092, uniprot: P15373

Nearby Genes

500 ntgarK and garR are separated by 96 nucleotidesgarR and garL are separated by 35 nucleotidesgarL and garP are separated by 15 nucleotidesgarP and garD are separated by 374 nucleotidesgarD and sohA are separated by 148 nucleotidessohA and yhaV overlap by 1 nucleotidesyhaV and agaR are separated by 54 nucleotidesagaR and kbaZ are separated by 248 nucleotideskbaZ and agaV are separated by 22 nucleotidesagaV and agaW are separated by 10 nucleotides b3124: garK - glycerate kinase I (RefSeq), at 3,268,647 to 3,269,792 garK b3125: garR - tartronate semialdehyde reductase (RefSeq), at 3,269,889 to 3,270,773 garR b3126: garL - alpha-dehydro-beta-deoxy-D-glucarate aldolase (NCBI), at 3,270,809 to 3,271,579 garL b3127: garP - predicted (D)-galactarate transporter (NCBI), at 3,271,595 to 3,272,929 garP b3128: garD - (D)-galactarate dehydrogenase (NCBI), at 3,273,304 to 3,274,875 garD b3129: sohA - predicted regulator (NCBI), at 3,275,024 to 3,275,359 sohA b3130: yhaV - hypothetical protein (NCBI), at 3,275,359 to 3,275,823 yhaV b3131: agaR - DNA-binding transcriptional dual regulator (NCBI), at 3,275,878 to 3,276,687 agaR b3132: kbaZ - tagatose 6-phosphate aldolase 1, kbaZ subunit (NCBI), at 3,276,936 to 3,278,216 kbaZ b3133: agaV - PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS), at 3,278,239 to 3,278,712 agaV b3134: agaW - N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq), at 3,278,723 to 3,279,097 agaW
Locus Name Description Strand Phenotype
b3124 garK glycerate kinase I (RefSeq) - strong
b3125 garR tartronate semialdehyde reductase (RefSeq) - insig.
b3126 garL alpha-dehydro-beta-deoxy-D-glucarate aldolase (NCBI) - sig.
b3127 garP predicted (D)-galactarate transporter (NCBI) - strong
b3128 garD (D)-galactarate dehydrogenase (NCBI) + insig.
b3129 sohA predicted regulator (NCBI) + sig.
b3130 yhaV hypothetical protein (NCBI) + insig.
b3131 agaR DNA-binding transcriptional dual regulator (NCBI) - strong
b3132 kbaZ tagatose 6-phosphate aldolase 1, kbaZ subunit (NCBI) + insig.
b3133 agaV PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) + insig.
b3134 agaW N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) + insig.

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