Gene info for b3068 in Escherichia coli BW25113

Name: ygjF
Annotation: G/U mismatch-specific DNA glycosylase (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 3,212,989 to 3,213,495
See nucleotide sequence around b3068 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315033, uniprot: P0A9H1

Nearby Genes

500 ntygjE and ygjD are separated by 42 nucleotidesygjD and rpsU are separated by 237 nucleotidesrpsU and dnaG are separated by 110 nucleotidesdnaG and rpoD are separated by 194 nucleotidesrpoD and ygjF are separated by 78 nucleotidesygjF and ileX are separated by 124 nucleotidesileX and yqjH are separated by 53 nucleotidesyqjH and yqjI are separated by 287 nucleotidesyqjI and aer are separated by 153 nucleotidesaer and ygjG are separated by 417 nucleotides b3063: ygjE - predicted tartrate:succinate antiporter (NCBI), at 3,206,046 to 3,207,509 ygjE b3064: ygjD - O-sialoglycoprotein endopeptidase (NCBI), at 3,207,552 to 3,208,565 ygjD b3065: rpsU - 30S ribosomal protein S21 (NCBI), at 3,208,803 to 3,209,018 rpsU b3066: dnaG - DNA primase (NCBI), at 3,209,129 to 3,210,874 dnaG b3067: rpoD - RNA polymerase sigma factor (NCBI), at 3,211,069 to 3,212,910 rpoD b3068: ygjF - G/U mismatch-specific DNA glycosylase (NCBI), at 3,212,989 to 3,213,495 ygjF b3069: ileX - tRNA-Ile (NCBI), at 3,213,620 to 3,213,695 ileX b3070: yqjH - predicted siderophore interacting protein (NCBI), at 3,213,749 to 3,214,513 yqjH b3071: yqjI - predicted transcriptional regulator (NCBI), at 3,214,801 to 3,215,424 yqjI b3072: aer - fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI), at 3,215,578 to 3,217,098 aer b3073: ygjG - putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent (RefSeq), at 3,217,516 to 3,218,895 ygjG
Locus Name Description Strand Phenotype
b3063 ygjE predicted tartrate:succinate antiporter (NCBI) + insig.
b3064 ygjD O-sialoglycoprotein endopeptidase (NCBI) - no data
b3065 rpsU 30S ribosomal protein S21 (NCBI) + no data
b3066 dnaG DNA primase (NCBI) + no data
b3067 rpoD RNA polymerase sigma factor (NCBI) + no data
b3068 ygjF G/U mismatch-specific DNA glycosylase (NCBI) - sig.
b3069 ileX tRNA-Ile (NCBI) + no data
b3070 yqjH predicted siderophore interacting protein (NCBI) - sig.
b3071 yqjI predicted transcriptional regulator (NCBI) + strong
b3072 aer fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) - insig.
b3073 ygjG putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent (RefSeq) + sig.

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