Gene info for b3067 in Escherichia coli BW25113

Name: rpoD
Annotation: RNA polymerase sigma factor (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 3,211,069 to 3,212,910
See nucleotide sequence around b3067 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646315032, uniprot: P00579

Nearby Genes

500 ntttdB and ygjE are separated by 47 nucleotidesygjE and ygjD are separated by 42 nucleotidesygjD and rpsU are separated by 237 nucleotidesrpsU and dnaG are separated by 110 nucleotidesdnaG and rpoD are separated by 194 nucleotidesrpoD and ygjF are separated by 78 nucleotidesygjF and ileX are separated by 124 nucleotidesileX and yqjH are separated by 53 nucleotidesyqjH and yqjI are separated by 287 nucleotidesyqjI and aer are separated by 153 nucleotides b3062: ttdB - L(+)-tartrate dehydratase (NCBI), at 3,205,393 to 3,205,998 ttdB b3063: ygjE - predicted tartrate:succinate antiporter (NCBI), at 3,206,046 to 3,207,509 ygjE b3064: ygjD - O-sialoglycoprotein endopeptidase (NCBI), at 3,207,552 to 3,208,565 ygjD b3065: rpsU - 30S ribosomal protein S21 (NCBI), at 3,208,803 to 3,209,018 rpsU b3066: dnaG - DNA primase (NCBI), at 3,209,129 to 3,210,874 dnaG b3067: rpoD - RNA polymerase sigma factor (NCBI), at 3,211,069 to 3,212,910 rpoD b3068: ygjF - G/U mismatch-specific DNA glycosylase (NCBI), at 3,212,989 to 3,213,495 ygjF b3069: ileX - tRNA-Ile (NCBI), at 3,213,620 to 3,213,695 ileX b3070: yqjH - predicted siderophore interacting protein (NCBI), at 3,213,749 to 3,214,513 yqjH b3071: yqjI - predicted transcriptional regulator (NCBI), at 3,214,801 to 3,215,424 yqjI b3072: aer - fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI), at 3,215,578 to 3,217,098 aer
Locus Name Description Strand Phenotype
b3062 ttdB L(+)-tartrate dehydratase (NCBI) + insig.
b3063 ygjE predicted tartrate:succinate antiporter (NCBI) + insig.
b3064 ygjD O-sialoglycoprotein endopeptidase (NCBI) - no data
b3065 rpsU 30S ribosomal protein S21 (NCBI) + no data
b3066 dnaG DNA primase (NCBI) + no data
b3067 rpoD RNA polymerase sigma factor (NCBI) + no data
b3068 ygjF G/U mismatch-specific DNA glycosylase (NCBI) - sig.
b3069 ileX tRNA-Ile (NCBI) + no data
b3070 yqjH predicted siderophore interacting protein (NCBI) - sig.
b3071 yqjI predicted transcriptional regulator (NCBI) + strong
b3072 aer fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) - insig.

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