Gene info for b2979 in Escherichia coli BW25113

Name: glcD
Updated annotation (from data): glycolate dehydrogenase, putative FAD-linked subunit
Rationale: Specific phenotype: utilization of Glycolic Acid
Original annotation: glycolate oxidase subunit, FAD-linked (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 3,124,544 to 3,126,043
See nucleotide sequence around b2979 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646314945, uniprot: P0AEP9

Nearby Genes

500 ntyghK and glcB are separated by 354 nucleotidesglcB and glcG are separated by 21 nucleotidesglcG and glcF are separated by 4 nucleotidesglcF and glcE are separated by 10 nucleotidesglcE and glcD overlap by 1 nucleotidesglcD and glcC are separated by 250 nucleotidesglcC and yghO are separated by 6 nucleotidesyghO and insH-9 are separated by 34 nucleotidesinsH-9 and yghQ are separated by 146 nucleotidesyghQ and yghR are separated by 45 nucleotides b2975: yghK - glycolate transporter (NCBI), at 3,117,619 to 3,119,301 yghK b2976: glcB - malate synthase (NCBI), at 3,119,656 to 3,121,827 glcB b2977: glcG - hypothetical protein (NCBI), at 3,121,849 to 3,122,253 glcG b4467: glcF - glycolate oxidase iron-sulfur subunit (NCBI), at 3,122,258 to 3,123,481 glcF b4468: glcE - glycolate oxidase FAD binding subunit (NCBI), at 3,123,492 to 3,124,544 glcE b2979: glcD - glycolate dehydrogenase, putative FAD-linked subunit (from data), at 3,124,544 to 3,126,043 glcD b2980: glcC - DNA-binding transcriptional dual regulator, glycolate-binding (NCBI), at 3,126,294 to 3,127,058 glcC b2981: yghO - predicted DNA-binding transcriptional regulator (RefSeq), at 3,127,065 to 3,128,165 yghO b2982: insH-9 - IS5 transposase and trans-activator (NCBI), at 3,128,200 to 3,129,216 insH-9 b2983: yghQ - predicted inner membrane protein (NCBI), at 3,129,363 to 3,130,430 yghQ b2984: yghR - predicted protein with nucleoside triphosphate hydrolase domain (NCBI), at 3,130,476 to 3,131,234 yghR
Locus Name Description Strand Phenotype
b2975 yghK glycolate transporter (NCBI) - insig.
b2976 glcB malate synthase (NCBI) - strong
b2977 glcG hypothetical protein (NCBI) - strong
b4467 glcF glycolate oxidase iron-sulfur subunit (NCBI) - strong
b4468 glcE glycolate oxidase FAD binding subunit (NCBI) - strong
b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) - strong
b2980 glcC DNA-binding transcriptional dual regulator, glycolate-binding (NCBI) + strong
b2981 yghO predicted DNA-binding transcriptional regulator (RefSeq) - insig.
b2982 insH-9 IS5 transposase and trans-activator (NCBI) + no data
b2983 yghQ predicted inner membrane protein (NCBI) - insig.
b2984 yghR predicted protein with nucleoside triphosphate hydrolase domain (NCBI) - insig.

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