Gene info for b2212 in Escherichia coli BW25113

Name: alkB
Annotation: oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 2,306,713 to 2,307,363
See nucleotide sequence around b2212 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646314169, uniprot: P05050

Nearby Genes

500 ntnapF and yojO are separated by 108 nucleotidesyojO and eco are separated by 134 nucleotideseco and mqo are separated by 714 nucleotidesmqo and yojI are separated by 217 nucleotidesyojI and alkB are separated by 75 nucleotidesalkB and ada overlap by 1 nucleotidesada and yojL are separated by 73 nucleotidesyojL and ompC are separated by 111 nucleotidesompC and micF are separated by 334 nucleotidesmicF and rcsD are separated by 311 nucleotides b2208: napF - ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI), at 2,301,025 to 2,301,519 napF b4604: yojO - hypothetical protein (RefSeq), at 2,301,628 to 2,301,792 yojO b2209: eco - ecotin precursor (NCBI), at 2,301,927 to 2,302,415 eco b2210: mqo - malate:quinone oxidoreductase (NCBI), at 2,303,130 to 2,304,776 mqo b2211: yojI - fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI), at 2,304,994 to 2,306,637 yojI b2212: alkB - oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI), at 2,306,713 to 2,307,363 alkB b2213: ada - fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI), at 2,307,363 to 2,308,427 ada b2214: yojL - predicted thiamine biosynthesis lipoprotein (NCBI), at 2,308,501 to 2,309,556 yojL b2215: ompC - outer membrane porin protein C (NCBI), at 2,309,668 to 2,310,771 ompC b4439: micF - regulatory sRNA (NCBI), at 2,311,106 to 2,311,198 micF b2216: rcsD - phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI), at 2,311,510 to 2,314,182 rcsD
Locus Name Description Strand Phenotype
b2208 napF ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) - insig.
b4604 yojO hypothetical protein (RefSeq) + no data
b2209 eco ecotin precursor (NCBI) + sig.
b2210 mqo malate:quinone oxidoreductase (NCBI) - insig.
b2211 yojI fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) - strong
b2212 alkB oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) - sig.
b2213 ada fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI) - insig.
b2214 yojL predicted thiamine biosynthesis lipoprotein (NCBI) - strong
b2215 ompC outer membrane porin protein C (NCBI) - strong
b4439 micF regulatory sRNA (NCBI) + no data
b2216 rcsD phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) + strong

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